| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3....,.... |
| seq | CSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCNASVT | | | |
| dssp | ----EEEE----EEEEHHHHH------HHHH-HHHH--- | | | |
| jufo | -----HHHHHHHH-----EE------------------- | -34.3 | -47.8 | -0.08 |
| phd | ----E---------------------------------- | -22.1 | -47.1 | -0.10 |
| phdpsi | ----E---------------------------------- | -24.1 | -48.9 | -0.12 |
| prof_king | ------HHHHHHH-------------------------- | -37.2 | -51.9 | -0.18 |
| profsec | ----HHH--HHH--------------------------- | -36.4 | -51.1 | -0.21 |
| prospect | -----HHHHHHHH-----EE------------------- | -35.7 | -48.5 | -0.11 |
| psipred | ---HHHHHHHHHH----EEEE------------------ | -42.2 | -52.4 | -0.10 |
| samt99_sec | ----HHHHHHHHH-----EE------------E------ | -38.7 | -42.4 | -0.09 |
| scratch | --HHHHHHHHHHH------E------------------- | -44.5 | -54.3 | -0.14 |