EVA results for 1ogs:A

DATE : 2003_07_08
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41...,....42...,....43...,....44...,....45...,....46...,....47...,....48...,....49...,..
seq	ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
dssp	-E---EEE-----EEEEEE-----E----------EEEEEEEE------EEEEEE-E-------EEEEEEEEEEEEE--EEEEE--HHHHHHH----HHHHHHHHHHHH--------EEEEEE---------------------------HHHH--HHHHHHHHHHH-----EEEEEE----HHHE---------EE------HHHHHHHHHHHHHHHHHHH------EEE------HHH---------E--HHHHHHHHHH-HHHHHH-------EEEEEEEEHHH--HHHHHHH--HHHH----EEEEEEE------HHHHHHHHHHH----EEEEEEEE--------------HHHHHHHHHHHHHHHH--EEEEEEEE--E----------------EEEEHHH-EEEE-HHHHHHHHHH-------EEEEEEE-----EEEEEEE-----EEEEEEE-----EEEEEEE---EEEEEEE---EEEEEEE---
jufo	------------EEEEEEE-----------------EEEEEE------EEE--------------EEEEE-----EEEEE----HHHHHHHHHH-----HHHHHHHHHH------EEEEEEE-------------------------------HHHHHHHHHHHHHH----EEEEEE---------------------------HHHHHHHHHHHHHHHHHH----EEEEE---------------------HHHHHHHHHHHHHHHHH------EEEEEE-------HHHHHHH---HHHHHHHHH--EEE---------------HH-----HHHHHHH-----------------HHHHHHHHHHHHH---EEEEEEEE------------------EEEEE------------HHHH---------EEEE---------HHHEEEEE----EEEEEEE-----EEEEEE-----EEEEE-----EEEEEEE--	+5.8	+5.5	+0.1
phd	-------E----EEEEEE------------------EEEEEE-----EEEEEE-EEE--------EEEE-------EEE---HHHHHHHHHHHHH--HHHHHHHHHHH------EEEEEEEEE--------------------------------HHHHHHHHHHHH----EEEEE---------------------------HHHHHHHHHHHHHHHHHHH----EEEEEE---------------------HHHHHHHHHHHHHHHHH------EEEEE------------------HHHHHHHEEEEEEE-------HHHHHHHH-------EEEEE-----------------HHHHHHHHHHHHHHHH----EEEEEEEEE---------------EEE------E-----EEEEEHHHHE-----EEEE---------EEEEEE----EEEEEEEE-----EEEEEE------EEE--------EEEEE--	+4.6	+5.2	+0.07
phdpsi	-------E----EEEEEE------------------EEEEEE-----EEEEEE-EEE--------EEEE-------EEE---HHHHHHHHHHHHH--HHHHHHHHHHH------EEEEEEEEE--------------------------------HHHHHHHHHHHH----EEEEE---------------------------HHHHHHHHHHHHHHHHHHH----EEEEEE---------------------HHHHHHHHHHHHHHHHH------EEEEE------------------HHHHHHHEEEEEEE-------HHHHHHHH-------EEEEE-----------------HHHHHHHHHHHHHHHH----EEEEEEEEE---------------EEE------E-----EEEEEHHHHE-----EEEE---------EEEEEE----EEEEEEEE-----EEEEEE------EEE--------EEEEE--	+2.9	+3.6	+0.05
prof_king	-----------EEEEEEE------------------EEEEEE-----EEEEHHHHHH------EEEEEE--HHHHHHH------------EEEEE--HHHHHHHHHHH-------EEEEEEEEEEE----EEEEEE------EEEE--------EEEE-HHHHHHHH-----EEEE-------EEEEE----------------HHHHHHHHHHHHHHHHH----EEEEEEEE-------------------HHHHHHHHHHH-----------EEEEEEEE-----------EE---HHHH----EEEEEEE-----HHHHHHHHHHH-----EEEE---------------EEEE--------HEEE----EEEEEEEEEEE-----------------EEEEE----------EEE------------EEEEEEE-----EEEEEEEE----EEEEEEE-----EEEEEEE----EEEEE-----EEEEEEE--	-4.7	-5.2	-0.07
profsec	-------------EEEEE------------------EEEEEE-----EEEEEEEEEE-------EEEEE-----EEEEEE--HHHHHHHHHHHH---HHHHHHHHHHH-------EEEEEEEE----------------------------HHHHHHHHHHHHHHHH----EEEEE---------------------------HHHHHHHHHHHHHHHHHHH----EEEEE---------------------HHHHHHHHHHHH-HHHHH-----EEEEEEE--------HHHHH---HHHHHHH-EEEEEE---------HHHHHHHHH----EEEEEEEE--------------HHHHHHHHHHHHHHHHHH---EEEEEEEE----------------EEEE----EEEE--EEEEHHHHHH------EEEEEEE-----EEEEEEEE----EEEEEEE----EEEEEEE----EEEEEE-----EEEEEEEE-	+7.7	+7.1	+0.13
prospect	-------------EEEEE---HHHH-----------EEEEEE-----EEEEEE------------EEEE--------EEE----HHHHHHHHHH---HHHHHHHHHH--------EEEEEEEE------------------------------HHHHHHHHHHHHHH-----EEEE---------EE---------------HHHHHHHHHHHHHHHHHHHH---EEEE------------------EEEE-HHHHHHHHHHHHHHHHHH-----EEEEEE--------HHHHHHH--HHHHHHHH-EEEEEE--------HHHHHHHHH-----EEEEEEE------------------HHHHHHHHHHHHHHHHHHHHHHHHHH------EEE--EE-EEEE-----EEEE---EEHHHHHHH-----EEEEE---------EEEEEE-----EEEEEEE-----EEEEEE-----EEEE------EEEEEEE--	+3.2	+4.1	+0.03
psipred	-------------EEEEE------------------EEEEEE-----EEEEEEEEEE-------EEEEE-------EEEEE----HHHHHHHH----HHHHHHHHHHH-------EEEEEEEE------------------------------HHHHHHHHHHHHHH----EEEEE------HHH------------------HHHHHHHHHHHHHHHHHHH----EEEEEE--------------------HHHHHHHHHHHHHHHHHH------EEEEE-------HHHHHHH---HHHHHHH-HHEEEE----------HHHHHHHH-----EEEEE-----------------HHHHHHHHHHHHHH---EEEEEEEEEEE------------EEEEEEE-----EEEE--HHHHHHHHHHH-----EEEEEE-------EEEEEE-----EEEEEEE-----EEEEEEE---EEEEEE-----EEEEEEEE-	+6.8	+8.3	+0.12
samt99_sec	---HHHHHHHHHEEEEEEE------------------EEEE------HH---------------EEEEE-----EEEEE-------HHHHHHHH---HHHHHHHHHHHH------EEEEEEEE-----------------------------HHHHHHHHHHHHHHHH---EEEEE--------E-----------------HHHHHHHHHHHHHHHHHHHHH---EEEEEE----------------EE--HHHHHHHHHHHHHHHHHHH----EEEEEE--------HHHHHHH--HHHHHH--EEEEEEE------HHHHHHHHHHH----EEEE------------------HHHHHHHHHHHHHHHHH---EEEEEEEE-----------------EEEE-----EEE---EEEHHHHHH------EEEEE-------EEEEEEE-----EEEEEE------EEEEEEE----EEEEE------EEEEE---	+4.7	+8.0	+0.09
scratch	-------E----EEEEEEE----------------EEEEEEE-----EEEE-------------EEEEE-----EEEEE--------HHHHHHH---HHHHHHHHHHH-------EEEEEEE-----------E------------------H----HHHHHHHHHHH----EEEE---------------------------HHHHHHHHHHHHHHHHHHH----EEEEEE--------------------HHHHHHHHHHH---HH-------EEEEE---H------HHHHHH--HHHHHH--EEEEEE---------HHHHHHHHH----EEEEEE-------HHH------HHHHHHHHHHHHHHHHH--EEEEEHHH------------------EEEE----HH----HHHHHHHH--------EEEEEEE-----EEEEEEE-----EEEEEEE------EEEEE----EEEEE------EEEEEE---	+5.7	+6.3	+0.12

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva