EVA results for 1nrj:A

DATE : 2003_03_25
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,..
seq	MFDQLAVFTPQGQVLYQYNCLGKKFSEIQINSFISQLITSPVTRKESVANANTDGFDFNLLTINFNALFYLNKQPELYFVVTFAEQTLELNQETQQTLALVLKLWNSLHLSESILKNRQGQNEKNKHNYVDILQGIEDDLKKFEQYF
dssp	---EEEEE----EEEEEEE-------HHHHHHHHHHHHH----HHHEE--HHH----EEEEE---EEEEEEEE--EEEEEEEE----HHHHHHHHHHHHHHHHHHHH--HHHHHHHH-------------------HHHHHHHH---
apssp2	----EEEE-----EEEEE------HHHHEHHHHHHHHH-------HHH---------EEEEEE---EEEEE-----EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH-----------HHHHHHHHHHHHHHHHHHHH	-0.7	+5.8	+0.02
phd	---EEEE----EEEEEEEEHHH-HHHHHHHHHHHHHHHHHEHHHHHHHHH-----EEEEEEEEEHHHHHHHH--HHHHHHHHHHHHHHH---HHHHHHHHHHHHHH---HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH	-15.0	-14.3	-0.13
phdpsi	---EEEE----EEEEEEEEHHH-HHHHHHHHHHHHHHHHHEHHHHHHHHH-----EEEEEEEEEHHHHHHHH--HHHHHHHHHHHHHHH---HHHHHHHHHHHHHH---HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH	-17.1	-16.2	-0.15
prof_king	---EEEEE-----EEEEEE-------EEEHHHHHHHHH-----EEEEE--------EEEEEEE--EEEEEE----EEEEEEEEE-HHHHHHHHHHHHHHHHHHHHH----HHHHHH------------EEEEEH--H-HHHHHHHHH	+5.8	+6.4	+0.11
profsec	---EEEE-----EEEEHHHHH-----HHHHHHHHHHHHH---HHH------------EEEEEEEHHHHHHHH----EEEEEEE---EEE----HHHHHHHHHHHHH----HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHE	-9.1	+1.1	-0.14
prospect	----HHHHHHH-EEEEEEE-----HHHH---------EE-------HHHHHHH-----EE----EE--EE------EEE------EEE-------HHHHHHH-----EEE-----------------EE------------------	-24.5	-22.7	-0.23
psipred	----EEEE-----EEEEE------HHHHHHHHHHHHHH------HHHH--------EEEEEEE---EEEEE-----EEEEEEE-HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH----------HHHHHHHHHHHHHHHHHHHH	+0.6	+10.2	+0.05
scratch	---EEEEE----EEEEEE--------HHEEHHHHHHH---------EEE--------EEEEEE-HHHHHHHH----EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-----------HHHHHH-HHHHHHHHHHHE	-2.8	-6.5	-0.02

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva