EVA results for 1nb8:A

DATE : 2003_01_07
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20..
seq	KKHTGYVGLKNQGATCYXNSLLQTLFFTNQLRKAVYXXPTEGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFXQHDVQELCRVLLDNVENKXKGTCVEGTIPKLFRGKXVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLXRFX
dssp	--------E--------HHHHHHHHH--HHHHHHHH------------HHHHHHHHHHHHHH----E--HHHHHHH---E--------HHHHHHHHHHHHHHH--------HHHHHH-EEEEEEEEE-----EEEEEEEE--EEE------EHHHHHHHH---EEE-----EE-HHH-EE-EEEEEEE-----EEEEEE----
apssp	-----EEEEE---------HHHHHHHH-HHHHHHH-------------HHHHHHHHHHHH---------HHHHHH-----------HHHHHHHHHHHHHHH------------EEEEE----EEEEEE------EEE--EE-HH--------HHHHHHHHEEHHHH-------------HHEEEEEEEEE---HHEEE-----	+6.0	+22.0	-0.02
apssp2	------E---E--------HHHHHHHH-HHHHHHH------------HHHHHHHHHHHHHHH------HHHHHHHH----------HHHHHHHHHHHHHHH----------------E----EEEEE-----EEEEE--EEEEE--------HHHHHHHH----E--------------EEEEEEEEEEE----EEEE-----	+2.9	+3.1	+0.09
phd	------E------HHHHHHHHHHHHHH-HHHHHHHHH----------HHHHHHHHHHHHHH--------HHHHHHH-----------HHHHHHHHHHHHHHHH-------HHHHHHHH-EEEEEEEEEE----------E-EEEEE-----HHHHHHHHH-----------------------EEEE------EEEEEEEEE-	+7.8	+7.4	+0.17
phdpsi	------E------HHHHHHHHHHHHHH-HHHHHHHHH----------HHHHHHHHHHHHHH--------HHHHHHH-----------HHHHHHHHHHHHHHHH-------HHHHHHHH-EEEEEEEEEE----------E-EEEEE-----HHHHHHHHH-----------------------EEEE------EEEEEEEEE-	+5.3	+5.2	+0.14
prof_king	-----EEEEE----EEHHHHHHHHHH----HHHHHH------------HHHHHHHHHHHHH--------HHHHHH-------------HHHHHHHHHHHHHHH---------EEEEEEEEEEEEEEEEE---------EEEEEEEE------HHHHHHHH--------------------EEEEEEEEE----EEEEEEEEEE	+2.9	+2.8	+0.11
profsec	-----EEEEE----HHHHHHHHHHHHH-HHHHHHHHH-----------HHHHHHHHHHHHH-------HHHHHHHH------------HHHHHHHHHHHHHH----------HHHHH------EEEEEE---EE-----EEEEEEEE---HHHHHHHHHHH------------------------EEEE----EEEEEEEEEE	-1.3	-0.7	+0.05
psipred	---------EE---HHHHHHHHHHHH--HHHHHHHHHHH---------HHHHHHHHHHHHH-------HHHHHHH---------HHHHHHHHHHHHHHHHHHH---------HHHH--EEEEEEEEE-----EEEEE--EEEEEHHH-----HHHHHHHHHHHH---------------EEEEEEEEEEE---EEEEEEEEEE	+0.9	+2.7	+0.03
sspro2	--------------HHHHHHHHHHHH--HHHHHHHHH-----------HHHHHHHHHHHHH-------HHHHHHHH-H-------H--HHHHHHHHHHHHHHH--------HHHHHH--EEEEEEEE-----EEEEE----E----------HHHHHHHH--H-H--------------EEEEEEEEE-----EEEEEEEEEE	+8.2	+8.2	+0.17

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva