EVA results for 1n3k:A

DATE : 2003_01_14
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....1
seq	MAEYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEEEIIKLAPPPKKA
dssp	-HHHHHHHHHHHHH--HHHHHHHHHHH-----HHHH-----HHHHHHHHHH---------HHHHHHHHH---HHHHHHHHHHHHHHHHH------------------------------HHHH-------
apssp2	---HHHHHHHHH----HHHHHHHHHHHHHH---------HHHHHHHHHHHH---------HHHHHHHHHH--HHHHHHHHHHHHHHHHH-HHHHH---------HHHHHHHHH---HHHHEEE-------	-1.1	-15.8	-0.14
phd	-HHHHHHHHHHHHH--HHHHHHHHHHHHH----------HHHHHHHHHHHHHHH----HHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-----HHHHHHHHHHH----HHHE---HHHHHHH-------	+4.5	-12.2	-0.04
phdpsi	-HHHHHHHHHHHHH--HHHHHHHHHHHHH----------HHHHHHHHHHHHHHH----HHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-----HHHHHHHHHHH----HHHE---HHHHHHH-------	+2.4	-14.1	-0.06
prof_king	---HHHHHHHHH----HHHHHHHHHHHHH----------HHHHHHHHHHHH--------HHHHHHHHHH---HHHHHHHHHHHHHHHH---HHHH---------HHHHHHHHH---HHHHH---------	+2.3	-12.2	-0.12
profsec	--HHHHHHHHHHH---HHHHHHHHHHHHH------------HHHHHHHHHHH-------HHHHHHHHHHH-HHHHHHHHHHHHHHHHH------HHHHHH----------------HHHHHHH-------	+7.9	+2.5	-0.00
prospect	--HHHHHHHHH-----HHHHHHHHHHHHH-------HHHH-HHHHHHHHHH--------HHHHHHHHHHH---HHHHHHHHHHHHH----HHHHH---------------------HHHHHH--------	+5.5	+5.3	-0.07
psipred	--HHHHHHHHHH----HHHHHHHHHHHHHH-----------HHHHHHHHHH--------HHHHHHHHHH---HHHHHHHHHHHHHH------------HH--------EEEEE---HHHHEEE-------	+3.6	-11.1	-0.05
sspro2	--HHHHHHHHHHHH--HHHHHHHHHHHHH------------HHHHHHHHHHH----HHHHHHHHHHHHH-----HHEEEEE--HHEE----HHHH---------HHHHHHHH----HHHHHH--------	-5.8	-22.0	-0.16

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva