EVA results for 1n3j:A

DATE : 2003_01_28
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....
seq	MFNDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTALEDYLFSRKNMSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDDYWLSRPRLTQN
dssp	-E---EEEE-------EEEE---E---EEE-----EEE--HHHHHH---EEEEE--EEEEE---HHHHH-------EEEE------EEEEE---E---EEE------------------
apssp2	-----EEEEE-------EE---------EEEEEEEEEE-HHHHH------EEE----EHHH----HHH--------EEEEE----EEEEEE--------EEEEE---HHHH---HH---	-4.3	-18.0	-0.13
phd	---EEEEEEEE-------EEEE------EEEEEEEEE---HHHHHHHHHHEEE----EE-----EEEEE-------EEEEE---EEEEEEEEE-------EEE---HHHHHH-------	-9.5	-13.6	-0.13
phdpsi	---EEEEEEEE-------EEEE------EEEEEEEEE---HHHHHHHHHHEEE----EE-----EEEEE-------EEEEE---EEEEEEEEE-------EEE---HHHHHH-------	-11.6	-15.5	-0.15
prof_king	----EEEEEE------EEEEEE-----EEEEEEEEEEE----------EEEEE-----HHH----EEE--------EEEEE----EEEEEEEE------EEEEE-----E---------	-5.8	-11.1	-0.13
profsec	----EEEEEE-----EEEEEEEE-----EEEEEEEEEE---------EEEEEE----EEEEE--EEEEE-------EEEEEE---EEEEEEEE------EEEEE------HHHHH----	-12.9	-17.9	-0.21
prospect	-----EEEEE-------EEEEE------EEEEE--EEEE-HHHHHHH--EEEE-----HHHHHHHHHHH------EEEEE-----EEEEEEE-------EEEEE-------HHHHH---	-0.7	-5.2	-0.00
psipred	----EEEEEE-----EEEEE--------EEEEEE--EE-HHHH---HH-----HHHHHHHHH--HHHHH-------EEEEE----EEEEEE--------EEEEE---------------	-6.6	-1.3	-0.16
sspro2	-----EEEEE------EEEE--------EEEE-EEEEE--HHHHHHHHH--E------HHHH--EHEE--------EEEE-----EEEEEEEEEEE---EEEEE---HHHH---H----	-7.1	-18.8	-0.15

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva