EVA results for 1n05:A

DATE : 2003_02_25
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14.
seq	PEIVGPEKVQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKRVFPMVMSVSAEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK
dssp	--------------EEEEEEEE----HHHHH----EEEE---------------EEEEEEEE--EEEEEEEE--EEEEE-----------EEEEEEEEEEE-------HHHHHHHHHHHHHHHHHH---HHHHHHHH-HHH-
apssp2	-HHHHHHH------EEEEEEEEE-----------------HHHHHHHH------EEEEEEEE--EEEEEEEE-EEEEEEEE---------EEEEEEEE----------HHHHHHHHHHHHHHHHHHH---------------	-5.2	-11.1	+0.02
phd	HHHHHHHHHH-----EEEEEEEEE------------------------------EEEEEEEE----EEEEE--EEEEEEE----------EEEEHHHHHHH-------HHHHHHHHHHHHHHHHHHHH---HHHH-------	-1.1	+2.4	-0.01
phdpsi	HHHHHHHHHH-----EEEEEEEEE------------------------------EEEEEEEE----EEEEE--EEEEEEE----------EEEEHHHHHHH-------HHHHHHHHHHHHHHHHHHHH---HHHH-------	-3.2	+0.5	-0.03
prof_king	--------------EEEEEEEEE-------------------------------EEEEEEEE--EEEEEEEEEEEEEEEEE---------EEEEEEEEE---------HHHHHHHHHHHHHHHHHHH---------------	+7.2	+1.3	+0.18
profsec	HHHHHHHHHH----EEEEEEEEEE------------------------------EEEEEEEE---EEEEEEEEEEEEEEEE---------EEEEEEHHH---------HHHHHHHHHHHHHHHHHHHH-----HHH------	-4.0	-5.9	-0.03
prospect	HHHHHHHHH------EEEEEEEE-------EE------EE--------------EEEEEEEE------EEEEEEEEEEEE----------EEEEHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH-------	-3.8	+0.6	-0.05
psipred	-HHHHHHH------EEEEEEEEE-------------------------------EEEEEEEE--EEEEEEEE-EEEEEEEE---------EEEEEEHHHH--------HHHHHHHHHHHHHHHHHHH----HHHHH------	+1.9	-3.5	+0.03
samt99_sec	H--HHHHHHH----EEEEEEEE-------HH----EEE----H-----------EEEEEEEE---EEEEEEE-EEEEEEEH---------EEEEEEEEHH-HHH----HHHHHHHHHHHHHHHHHHHHH--HHHHH------	+2.6	+5.3	+0.11
scratch	--E-----------EEEEEEEEE-------H-----------------------EEEEEEEE------EEEE-EEEEEEE---HHH----EEEEEEHH---HHH----HHHHHHHHHHHHHHHHHHH----H---------E	-3.8	-5.3	-0.02
jufo	-------------EEEEEEEEEE-------------------------------EEEEEEEE-------EEE-EEEEE-HHH-----HHHHEEEHHHHH---------HHHHHHHHHHHHHHHHHHH---------------	-4.8	-8.9	-0.02

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva