| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,.... |
| seq | HXYYVIFAQDIPNTLEKRLAVREQHLARLKQLQAENRLLTAGPNPAIDDENPSEAGFTGSTVIAQFENLQAAKDWAAQDPYVEAGVYADVIVKPFKKVF | | | |
| dssp | --EEEEEEEE----HHHHHH-HHHHHHHHHHHHH---EEEEEEEE-------HHH-EEEEEEEEE---HHHHHHHHH--HHHH---EEEEEEEEE---- | | | |
| apssp2 | ---EEEEEEE----HHHHHHHHHHHHHHHHHHHH--EEEE-------------------EEEEEE---HHHHHHHHH----E----E--EEEEEEEE-- | +2.8 | +1.0 | +0.12 |
| phd | EEEEEEEE----HHHHHHHH--HHHHHHHHHHHH--EEEEE-----------------EEEEEEE---HHHHHHHHH--------EEEEEEEHHHH--- | +2.4 | +11.1 | +0.07 |
| phdpsi | EEEEEEEE----HHHHHHHH--HHHHHHHHHHHH--EEEEE-----------------EEEEEEE---HHHHHHHHH--------EEEEEEEHHHH--- | +0.9 | +9.7 | +0.05 |
| prof_king | EEEEEEEE----HHHHHHHH--HHHHHHHHHHHH---EEE-------------------EEEEEE---HHHHHHHH-----HH---EEEEEE------- | +2.9 | +13.7 | +0.15 |
| profsec | EEEEEEEEE----HHHHHHH--HHHHHHHHHHHH---EEE-------------------EEEEEEE--HHHHHHHHH---------EE-EEEEEHHH-- | -0.1 | +0.1 | +0.05 |
| psipred | -EEEEEEEEE---HHHHHHHHHHHHHHHHHHHHH--EEEEE------------------EEEEEEE--HHHHHHHHH---HHHH-----EEEEEEEE-- | +2.3 | +7.0 | +0.11 |
| samt99_sec | --EEEEEE-----HHHHHHHHHHHHHHHHHHHHHH--EEE-------------------EEEEEE---HHHHHHHHH--HHHH---EEEEEEEEEEE-- | +6.8 | +10.0 | +0.21 |
| scratch | -EEEEEEE------HHHHHHHHHHHHHHHHHHHH--------------------------EEEEEH--HHHHHHHHH-----E-EEEEEEEEE--HH-- | -5.8 | -6.5 | +0.02 |