| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3....,....4....,. |
| seq | PLHAYFKLPNTVSLVAGSSEGETPLNAFDGALLNAGIGNVNLIRIS | | | |
| dssp | ----------EEEEEEEEEE---HHHHHHHHHHHH-----EEEE-- | | | |
| apssp2 | HHHHHH----EEEEEE---------HHHHHHHHH-----EEEEEE- | -7.5 | +12.7 | -0.02 |
| phd | --EEE-E---EEEEEE--------HHHHHHHHHHH-----EEEEE- | +7.4 | -5.3 | +0.23 |
| phdpsi | --EEE-E---EEEEEE--------HHHHHHHHHHH-----EEEEE- | +5.3 | -7.2 | +0.21 |
| prof_king | -EEEEEE---EEEEEE-------------HHHHH-----EEEEEE- | -14.3 | -11.6 | -0.02 |
| profsec | --EEEE----EEEEEE-------HHHHHHHHHHHH------EEE-- | +5.2 | +4.2 | +0.24 |
| psipred | HHHHHH----EEEEEEE-------HHHHHHHHHH-----EEEEEE- | -3.8 | +13.9 | +0.02 |
| samt99_sec | ----------EEEEE-------HHHHHHHHHHHHH----EEEEEE- | +7.7 | +17.4 | +0.24 |
| scratch | ---EEEE---EEEEEE-------------HHHHH-----EEEEEE- | -13.3 | -9.2 | -0.03 |