EVA results for 1mn4:A

DATE : 2002_11_06
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...
seq	FKVGPPFELVRDYCPVVESHTGRTLDLRIIPRIDRGFDHIDEEWVGYKRSYFTLVSTFETANCDLDTFLKSSFDLLVEDSSVEGRLRVQYFAIKIKAKNDDDDTEINLVQHTPSVCPLVPSPLPKHQIIREASNVRNITKMKKYDSTFYLHRDHVNYEEYGVDSLLFSYPEDSI
dssp	-------EEEEE---EEE-----E--EEEEEEEEE--EE----EEEE----EEEEEEEEE----HHHHHH--EEEE--------EEEEEEEEEEEEEEE-----EE-EEE-----EEE-------HHHHHHH-----HHHH---HHHHEEEHHH--HHH-----HHHH----EE
apssp	-------EE------EEE-----E--EEE--------------EE-----EEEEEEE----------E-----EEEE-----HHHHHHHHHHHHHH--------EEEEEE---E-------------EEHHH------EEE-----EEEEE------E--------------HH	-36.6	-35.1	-0.31
apssp2	------HHHHHHH--E-------EEEEEEEE-----HHHH-HHHH----EEEEEEEEE------HHHHHHHHHHHE-E------EEEEEEEEEEEEE-------EEEEEE---E----------HHHHHHHHHH-HHHHHHHH---EEEEEE----HHHH-HHHHHHE--HHHH	-12.0	-9.2	-0.16
phd	-------EE--------------------EE--------HHHHHHHHHH--EEEEEEEEEE-------EE------E--------EEEEEEEEEEEE------HHHH--------------------EEEEE----HHH-------EEEEEE---------------------H	-14.1	-20.8	-0.14
phdpsi	-------EE--------------------EE--------HHHHHHHHHH--EEEEEEEEEE-------EE------E--------EEEEEEEEEEEE------HHHH--------------------EEEEE----HHH-------EEEEEE---------------------H	-16.8	-23.1	-0.18
prof_king	-------EEEE----EEEE----EEEEEEEEE---------HH------EEEEEEE-EE--------------EEEEEE------EEEEEEEEEEEE------EEEEEEEE---------------HEEEE--------EE-----EEEEE------------EEEE-------	-10.6	-14.4	-0.17
profsec	-------EEE------------------EEHHHH-----HHHHHHHH----EEEEEEEEEE-------------EEEE-EEEEEEEEEEEEEEEEEE------EEEE-EE--------------HHHEEEE--------------EEEEEEE--------EE-EEEE----HHH	-19.5	-26.5	-0.26
prospect	------HHHHH--------------EEEEE-----------HHHH-----EEEEEEHHHH-----HHHHHH---EEEE------EEEEEEEEEEE---------EEEEE------------------HHHHHH---HHHH-------EEE------HHHH---EEEE---HHHH	-10.3	-6.5	-0.16
psipred	------HHHHHHH--HH------EEEEEEEEE----HHHHH--EEEEEEEEEEEEEE--------------HHHHHEE-------EEEEEEEEEEEE-------EEEEEE--------------HHHHHHHHHHHHHHHHHHH---EEEEEE----HHHHHHHHHHHH--HHHH	-16.5	-21.7	-0.22
sspro2	-------HHHH----EEE------EEEEEE-----------HHH-EEE--EEEEEEE---------------HHEEEE-------EEEEEEEEEEEE--------EEEE-----------------HHHHHHHHHHHHHH------EEEEE-----HHH----EEEE-----HH	-11.1	-10.1	-0.20

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva