EVA results for 1mm5:A

DATE : 2002_09_18
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....1
seq	MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQFLEHHHHHH
dssp	--HHHHHHHHHHHHHHHHH----EEEEEEEEE--------------------EEEEEEEEEE---EEEEEEEEEEE-----EEEEEEEEEEEEE--------EEEEEEEEEEE---------EEEEEEEEEEEE--EEEEEEEEE------EEEEEEEEEEE--------
apssp	-----HHHHHHHHHHHH------------HHHHHHHHH-----------------------------EHHHHHHH-------------------------------------E-----------------------EEEEEEE---------HHHHHHHHHHHH------	-29.3	-31.6	-0.27
apssp2	--HHHHHHHHHHHHHHHH-------EEE--EEEEHH----HHH----------------HH------HHHHHHHHHH------------------------------EEEEEEE---------HHHHHHHHH----EEEEEEE---------EEHHHHHHHHHHHH----	-30.0	-30	-0.35
jpred	------HHHHHHHHHHH----------E-HHHHHHHHHH------------------------------EEEEEE---------------------------E-----E-EEEE----------EE-----------EEEEEEE--------EEEHHHHHHHHHH-----	-20.3	-21.2	-0.18
prof_king	--HHHHHHHHHHHHHHH--------EEEEEEE------------------------------------EEEEEEEE----------------EE---------E----EEEEEEE---------------EE----EEEEEEEE--------EEEEEEEHHHHH------	-5.1	-2.4	+0.02
prospect_secstruc	---HHHHHHHHHHHHHH-------------HHHHH-----HHHHH---------------EE------HHHHHHHH-------------HHHH---------------EEEEE---------------HHHHH---EEEEEEE---------EEEEEE-------HHHH-	-19.3	-18.9	-0.14
psipred	--HHHHHHHHHHHHHHHH------EEEEEEEEEEEE----HHHHHHH---------------------HHHHHHHHHH--------HHHHHHH--------EEE---EEEEEEEEE-------HHHHHHHHH----EEEEEEEE--------EEHHHHHHHHHHHH----	-26.1	-25.8	-0.26
samt99_sec	----HHHHHHHHHHHHHH-------EEE--HHHHHHE---HHHHH----------------------HHHHHHHHH--------------------------EE---EEEEEEE--------------EEEEE---EEEEEEE---------EEEEEEEEE-HHH-----	-17.4	-19.1	-0.16
sspro2	--HHHHHHHHHHHHHHHH-------EEE-HEEHHHHHHH----------------------------HHHHHHHHH--------------------------E-----E---E------------E-E--E-----EEEEEEE---------HHHHHHHHHHHHHH----	-23.9	-34.1	-0.17
prospect	---HHHHHHHHHHHHHH-------------HHHHH-----HHHHH---------------EE------HHHHHHHH-------------HHHH---------------EEEEE---------------HHHHH---EEEEEEE---------EEEEEE-------HHHH-	-19.3	-18.2	-0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva