EVA results for 1m4v:A

DATE : 2002_07_17
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8..
seq	AKYENVTKDIFDLRDYYSGASKELKNVTGYRYSKGGKHYLIFDKHQKFTRIQIFGKDIERLKTRKNPGLDIFVVKEAETVFS
dssp	-------HHHHHHHHHH----EEEEEEEEEEEEE--EEEEEEEE--EEEEEEE---HHHH----EEEEEEEEE---E--EEE
apssp	-----EE---EE---------HHHH-E-EEEE-----EEEEE-----EEEEEE----HHHHH-------EEEEEEEEEEEEE	+6.5	+19.8	+0.20
apssp2	---------HHHHHHHH------EEEEEEEEE-----EEEEE------EEEEEE--HHHHEE-------EEEEEE----EEE	-1.4	+15.3	+0.09
jpred	-----HHHHHHHHHH-------EEEEEEEEEE------EEEEE------EEEEE---HHHHH-------EEEEEE----EEE	-3.3	+12.2	+0.03
phd	--------HHHHHHHH-----------------------EE------------------------------EEEE-------	-24.7	-32.5	0.00
phdpsi	--------HHHHHHHH-----------------------EE------------------------------EEEE-------	-27.4	-34.8	-0.03
prof_king	-------HHHHHHHHH------EEEEEEEEEE----EEEEEEEE---EEEEEEE--------------EEEEEEE---EEEE	+4.7	+11.6	+0.13
profsec	-------HHHHHHHHHH------EEEEEEEEEE---EEEEEEEE---EEEEEEEE--HHHH--------EEEEEEE--EEEE	+2.7	+13.6	+0.11
prospect	---------HHHHHHHH----EEEEEEEEEEE-----EEEEEE----EEEEEEE---------------EEEEEE----EEE	+3.7	+11.4	+0.11
psipred	---------HHHHHHHH-----EEEEEEEEEEE----EEEEE-----EEEEEEEE--HHH---------EEEEEE----EEE	+1.0	+12.7	+0.09
samt99_sec	HHHHHH---HHHHHHHH----EEEE-EE-EE------EEEEEE------EEEEE---HHHHHH-----EEEEEEE----EEEE------------------EEEEEEE-----E----EEEE---EEEHHHHHHHHHHHHHHHH---------EEEEEEE----EEEEEEHHHHHHH-----------EEEEEEE-	-4.3	-7.9	+0.03
sspro2	-------H-HHHHHHHH-----EEEEEEEEEEE----EEEEE-------EEEEE-----EEE--------EEEEE----EEE	-4.8	-1.6	-0.01

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva