EVA results for 1m2e:A

DATE : 2002_11_13
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,
seq	MLSQIAICIWVESTAILQDCQRALSADRYQLQVCESGEMLLEYAQTHRDQIDCLILVAANPSFRAVVQQLCFEGVVVPAIVVGDRDSEDPDEPAKEQLYHSAELHLGIHQLEQLPYQVDAALAEFLRLAPVETMA
dssp	----EEEEEE---HHHHHHHHHH-----EEEEEE---HHHHHHH--------EEEEE-----HHHHHHHHHHH-----EEEE-------------HHH-----EEE-HHH---HHHHHHHHHHHHHH--------
apssp	-----EEHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH----HHHHHHHH------HHHHHHHHH--EEEEEEEE-----------HHHHHHHHHHHHH-HHHHH---HHHHHHHHHHHHH-------	-36.6	-35.1	-0.31
apssp2	-----EEEEE---HHHHHHHHHHHH---EHHHHHHHHHHHHHHHH-----EEEEEEEE----HHHHHHHHHH--EEEEEEEE-----------HHHHHEEEHHE---HHHHHH--HHHHHHHHHHHHH-------	-0.5	+7.6	0.00
phd	----EEEEEE--HHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHH-----EEEEEEEE----HHHHHHHHH----EEEEEEE--------------EEEEEEEE--HHHHHHHHHHHHHHHHHHHH--------	+4.9	+11.9	+0.08
phdpsi	----EEEEEE--HHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHH-----EEEEEEEE----HHHHHHHHH----EEEEEEE--------------EEEEEEEE--HHHHHHHHHHHHHHHHHHHH--------	+2.2	+9.6	+0.04
prof_king	---EEEEEEEE---HHHHHHHHHH----EEEEEE--HHHHHHHHHH-----EEEEEEE----HHHHHHHHHH---EEEEEEE-----------HHHHHHH-HHH---HHHH----HHHHHHHHHHHH--------	+8.2	+19.3	+0.16
profsec	---HHHHHHH---HHHHHHHHHHH-----EEEEE-HHHHHHHHHHH------EEEEEE-----HHHHHHHHH----EEEEEE----------------EEEEEEE--HHHHHH-HHHHHHHHHHHHH--------	+1.7	+10.2	+0.02
prospect	-----EEEEEE---HHHHHHHHHHH---EEE-----HHHHHHHHHH------EEEEE-----HHHHHHHHH----EEEEEEEE-------------HHHHH-EEEE-HHHHHH--HHHHHHHHHHH---------	+7.4	+18.7	+0.13
psipred	-----EEEEEE--HHHHHHHHHHHH----EEEEE-HHHHHHHHHH-----EEEEEEEE----HHHHHHHHHH--EEEEEEEE---------------EEEEEEEEE-HHHHHHHHHHHHHHHHHHHHH-------	+3.5	+9.5	+0.10
samt99_sec	----EEEEEEE---HHHHHHHHHHH--HHHHHHH--HHHHHHHHHHHHHH-EEEEEE-----HHHHHHHHHHH-EEEEEEEEE--------------EEEHHHHHH-HHHHHHHHHHHHHHHHHHHHH-------	-3.6	+1.4	-0.01
sspro2	---HHEEEEE--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHEHH---HHHHHHHHHH---EEEEEEEE-----------HHEEE--HHH---HHHHHH--HHHHHHHHHHHH--------	-9.1	-4.9	-0.13

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva