EVA results for 1lrz:A

DATE : 2002_09_04
TYPE : sec
NRES : 400
HEADER : ANTIBIOTIC INHIBITOR
COMPND : 2 MOLECULE: FACTOR ESSENTIAL FOR EXPRESSION OF METHICILLIN
SOURCE : 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS;
AUTHOR : T.BENSON, D.PRINCE, V.MUTCHLER, K.CURRY, A.HO, R.SARVER,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,...
seq	MKFTNLTAKEFGAFTDSMPYSHFTQTVGHYELKLAEGYETHLVGIKNNNNEVIAACLLTAVPVMKVFKYFYSNRGPVIDYENQELVHFFFNELSKYVKKHRCLYLHIDPYLPYQYLNHDGEITGNAGNDWFFDKMSNLGFEHTGFHKGFDPVLQIRYHSVLDLKDKTADDIIKNMDGLRKRNTKKVKKNGVKVRFLSEEELPIFRSFM
dssp	-EEEE--HHHHHHHHH----------HHHHHHHHH---EEEEEEEE-----EEEEEEEEEEEE---EEEEE-----EE----HHHHHHHHHHHHHHHH---EEEEEE----EEEEE-----EEEE----HHHHHHHH---EE--------------EEEEEE-----HHHHHH---HHHHHHHHHHH----EEEE--HHHHHHHHHH-
apssp	-EHHHHHHHHHH----------EEEEEEEEEEE-----EEEEEEEE----HHHHHHHHHH---EEEEEEEE-----EEE---HHHHHHHHHHHHHHHH----EEEE---------------EE-----HHHHHH-----------------EEEEEEEEEE-------HHHHHH---------HH-E----EEEEE------HHHHHH	-14.1	-7.1	-0.23
apssp2	-------HHHHHHHHHH-----E-E-HHHHHHHHH----EEEEEEE----EEEEEEEEE--------E-EE------------HHHHHHHHHHHHHHHH--EEEEE----HHHHHH------------HHHHHHHHH--EEE-------------EEEEEE------HHHHHH-----HHH--HHHHH---EEEE--HHHHHHHHHHH	-2.3	-7.2	-0.04
prof_king	--EEE--HHHHHHHHH-----EEEEEE--HEEEE----EEEEEEEE----EEEHHHHHH------EEEEEE-----------HHHHHHHHHHHHHHHHH--EEEEEE----HHHEE------------HHHHHHHHH----------------EEEEEEEE------HHHHHHHH-----EEEEEEEEEEEEEEH--HH--HHHHHH-	-4.8	-3.5	-0.07
prospect_secstruc	EEE----HHHHHHHH-----HHHH--HHHHHHHH-----EEEEEEE----EEEHHHHHH--------EEEEE---------HHHHHHHHHHHHHHHHHH---EEEEE-----EEEE-----------HHHHHHHHHH---EEE-------------EEEEE------HHHHHHHHHHHHHHHHHHHHH--EEEEE--HHHHHHHHHHH	+7.2	+7.5	+0.13
psipred	-------HHHHHHHHHH-----EEE-HHHHHHHH----EEEEEEEEE---EEEEEEHHHH------EEEEE-----------HHHHHHHHHHHHHHHHH---EEEEE---HHHHHH------------HHHHHHHHH-------------------EEEEE------HHHHHH-----HHHHHHHHHH---EEEE----HHHHHHHHH	+1.9	+2.0	+0.04
samt99_sec	---EE--HHHHHHHHHH--HHHHHH-HHHHHHHHH----EEEEEEE----EEEEEEEHHH------EEEEEE---------HHHHHHHHHHHHHHHHHH--EEEEEE---HHHHHH------------HHHHHHHHHH------------------EEEEE------HHHHHHHHHHHHHHHHHHHHHH--EEEE--HHHHHHHHHHH-HHHHHHHHHHH----EEEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH---EEEEEE----HHHHHH--HHHHHHHHHHHHHHH---EEEE---------------EEEEHH-----EEEEE--E-----HHHHHHHHHH	+4.2	+8.8	+0.07
sspro2	----E--HHHHHHHHH-----HEEE----HHHHHH---EEEEEEEE----EEEEEEEEE-------EEEEE-----EEE---HHHHHHHHHHHHHHHHH--EEEEEE-----HH--------------HHHHHHHHH------------------EEEEEE------HHHHHHHHHHHHHHHHHHHHH---EEEE--HHHHHHHHHHH	+5.8	+6.9	+0.15
prospect	EEE----HHHHHHHH-----HHHH--HHHHHHHH-----EEEEEEE----EEEHHHHHH--------EEEEE---------HHHHHHHHHHHHHHHHHH---EEEEE-----EEEE-----------HHHHHHHHHH---EEE-------------EEEEE------HHHHHHHHHHHHHHHHHHHHH--EEEEE--HHHHHHHHHHH	+7.5	+8.4	+0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
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