EVA results for 1lq9:A

DATE : 2003_01_14
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11.
seq	AEVNDPRVGFVAVVTFPVDGPATQHKLVELATGGVQEWIREVPGFLSATYHASTDGTAVVNYAQWESEQAYRVNFGADPRSAELREALSSLPGLMGPPKAVFMTPRGAILPS
dssp	-E-------EEEEEEEEE--HHHHHHHHHHH-----HHHHH---EEEEEEEEE----EEEEEEEE--HHHHHHH----HHHHHHHHHHH----E----EEEEEEEEEEE---
apssp2	--------EEEEEEEEE----HHHHHHHHHHHHHHHHHE------EEEEEE------EEHHHHHHHHHHHHHHHH-----HHHHHHHHHH---------EEEE---------	-6.1	-2.2	-0.07
phd	---------EEEEEEEEE----HHHHHHHHHHHHHHHHHHH----EEEEEEE-----EEEE----HHHHHHHHHHH-----HHHHHHH------------EEE------E--	+0.5	+3.2	+0.11
phdpsi	---------EEEEEEEEE----HHHHHHHHHHHHHHHHHHH----EEEEEEE-----EEEE----HHHHHHHHHHH-----HHHHHHH------------EEE------E--	-1.5	+1.3	+0.09
prof_king	--------EEEEEEEE----------EEEEE----EEEEEE---EEEEEEEE-----EEEEEE--------EEE------HHHHHHHHHH---------EEEE---------	-10.5	-3.0	-0.07
profsec	---------EEEEEEEEE----HHHHHHHHHHHHHHHHHH----EEEEEEEE-----EEEEEEEEE-HHHHHHHH------HHHHHHHH-----------------------	+0.7	-4.7	+0.10
prospect	---------EEEEEEEEE-----HHHHHHHHHHHHHHHH------EEEEEEE---HHHHH-HHHHH-HHHHHHHH-----HHHHHHHHH-----------EEE---------	-4.2	-4.6	0
psipred	---------EEEEEEEE------HHHHHHHHHHHHHHHH------EEEEEEE-----EEEEHHHH--HHHHHHHH------HHHHHHHHH----------------------	-6.8	-7.8	-0.03
samt99_sec	---------EEEEEEEE----HHHHHHHHHHHHHHHHHHH-----EEEEEEE-----EEEEHHHHHHHHHHHHHHH-----HHHHHHHHH---------EEE----------	-3.4	-1.3	+0.02
sspro2	-------EEEEEEEE-----HHHHHHHHHHHHHHHHHHHHH---EEEEEEEE-----EEEEEEEE--HHHHEE-------HHHHHHHHHH---------EEEE---------	+2.4	+6.1	+0.10

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva