EVA results for 1lj6:A

DATE : 2002_05_15
TYPE : sec
NRES : 153
HEADER : METAL BINDING PROTEIN
COMPND : 2 MOLECULE: TROPONIN C;
SOURCE : 2 ORGANISM_SCIENTIFIC: SUS SCROFA;
AUTHOR : K.YADUGIRI, S.C.MALLENA, K.M.BEESETTI

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15..
seq	VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
dssp	-----HHHHHHHHHHHHHH--------E-HHHHHHHHHHH-----HHHHHHHHHHH-------E-HHHHHHHHHHHHHHH---HHHHHHHHHHHHH-------E-HHHHHHHHHHH-----HHHHHHHHHHH-------E-HHHHHHHHH---
apssp	--HHHHHHHHHHHHHHHHH-------EE-HHHHHHHHHH------HHHHHHHHHHH-------E-HHHHHHHHHHHH------HHHHHHHHHHHHH------EEEHHHHHHHHHH------HHHHHHHHHHH------EEEHHHHHHHHH---	+14.8	+23.5	+0.25
apssp2	-----HHHHHHHHHHHHHH-------EE-HHHHHHHHHH------HHHHHHHHHHH-------E-HHHHHH-HHHHHH-------HHHHHHHHHHH------EEEHHHHHHHHHH--------HH-HHHHHH------EEEHHHHHHHHH---	+6.6	+5.1	+0.13
jpred	-----HHHHHHHHHHHHHH----------HHHHHHHHHHH-----HHHHHHHHHHH---------HHHHHHHHHHHH-------HHHHHHHHHHHH---------HHHHHHHHHH------HHHHHHHHHHH--------HHHHHHHHH----	+18.8	+24.8	+0.35
phd	-----HHHHHHHHHHHHHH----------HHHHHHHHHHH-----HHHHHHHHHHH---------HHHHHHHHHHHHH-------HHHHHHHHHHH---------HHHHHHHHHHH-----HHHHHHHHHHH---------HHHHHHHHH---	+24.1	+27.5	+0.52
phdpsi	-----HHHHHHHHHHHHHH----------HHHHHHHHHHH-----HHHHHHHHHHHHH-------HHHHHHHHHHHH-------HHHHHHHHHHHH---------HHHHHHHHHHH-----HHHHHHHHHHH---------HHHHHHHHH---	+19.2	+23.7	+0.38
prof_king	-----HHHHHHHHHHHHHH-------EE-HHHHHHHHHHH-----HHHHHHHHHHH-------E-HHHHHHHHHHHH--------HHHHHHHHHHH---------HHHHHHHHHH------HHHHHHHHHHH---------HHHHHHHHH---	+19.4	+25.7	+0.4
profsec	-----HHHHHHHHHHHHHH----------HHHHHHHHHHH-----HHHHHHHHHHH---------HHHHHHHHHHHH--------HHHHHHHHHHH---------HHHHHHHHHHH-----HHHHHHHHHHH---------HHHHHHHHH---	+17.5	+21.1	+0.39
psipred	-----HHHHHHHHHHHHHH-------EE-HHHHHHHHHH------HHHHHHHHHHH------EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHH------HHHHHHHHHHH------EE-HHHHHHHHH---	+15.5	+14.2	+0.3
sspro2	-----HHHHHHHHHHHHHH--------E-HHHHHHHHHHH-----HHHHHHHHHHH---------HHHHHHHHHHHHH----H-HHHHHHHHHHHH-------E-HHHHHHHHHHH-----HHHHHHHHHH----------HHHHHHHHH---	+18.4	+24.5	+0.38

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 15, 2002
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WWW: http://cubic.bioc.columbia.edu/eva