EVA results for 1lgx:A

DATE : 2002_05_15
TYPE : sec
NRES : 162
HEADER : HYDROLASE
COMPND : 2 MOLECULE: LYSOZYME;
SOURCE : 2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE T4;
AUTHOR : B.WEI, W.A.BAASE, L.WEAVER, B.W.MATTHEWS, B.K.SHOICHET

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16.
seq	MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCAAINQVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYK
dssp	--HHHHHHHHH--EEEEEE-----EEEE--EEEE----HHHHHHHHHHHH------E--HHHHHHHHHHHHHHHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHHHHHH-HHHHHHHH---HHHHHHHHH--HHHHH-HHHHHHHHHHHHH---HHH-
apssp	--HHHHHHHHH--EEEEEE-----EEEE--EEEE----HHHHHHHHHHHH------E--HHHHHHHHHHHHHHHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHHHHH---HHHHH-HHHHHHHHHHHHH---HHH-	+21.4	+27.7	+0.49
apssp2	--HHHHHHHHH--EEEEEE------EE---EEEE----HHHHHHHHHHHH------E--HHHHHHHHHHHHHHHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHHHHH--HHHHHHHH---HHH-HHHH---HHHHH-HHHHHHHHH-HHH---HHH-	+12.7	+10.5	+0.29
jpred	--HHHHHHHH----EEE-------EEEEE-E--E-----HHH---------------HHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH---HHHH-------EEEEEEE--------	-6.7	-6.9	-0.11
phd	-------------EEEEE-----EEEEE---EEE---------HHHHHH-------EE-HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-----HHHHHHHHHH--------	+6.5	+2.4	+0.12
phdpsi	--HHHHHHHH-----EEE------EEEEE-----------HHHH---------------HHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHH------HHHHHHHHHHHH-HHHHHHHHHHHH-----------EEEEEEE---E----	-10.0	-13.4	-0.13
prof_king	--HHHHHHHH----EEEEE-----EEEEEEEE-------HHHHHHH-HH-------EE-HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH-----H--HHHHHHHHHH--HHHHHHHHH---HH--------EEEEEEE--------	-1.8	-7.6	-0.04
profsec	--HHHHHHHH---EEEEEE-----EEEEEEEE------HHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHH--HHHHHHHHHHHHHH---HHHHHHHHHH------------EEEEEEEEEEEEE--	-1.8	-6.1	-0.04
psipred	--HHHHHHHH-----EEEE------EEEEE---------HHHHHH--HH-------EEEHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-------EEEEEEEE-------	-4.4	-16.5	-0.13
sspro2	--HHHHHEHH---EEEEEE---EEEEEEH-HH------HHHHHHHHHHHH-------EEHHHHHHHHHH-HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHH-----H-HEEEEH----------	-5.9	-18.3	-0.16

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 15, 2002
Contact: rost@columbia.edu
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