EVA results for 1l2r:A

DATE : 2002_06_05
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41...,....42...,....43...,....44...,....45...,..
seq	TFRKSFDCYDFYDRAKVGEKCTQDDWDLMKIPMKAMELKQKYGLDFKGEFIPTDKDMMEKLFKAGFEMLLECGIYCTDTHRIVKYTEDEIWDAINNVQKEFVLGTGRDAVNVRKRSVGDKAKPIVQGGPTGSPISEDVFMPVHMSYALEKEVDTIVNGVMTSVRGKSPIPKSPYEVLAAKTETRLIKNACAMAGRPGMGVKGPETSLSAQGNISADCTGGMTCTDSHEVSQLNELKIDLDAISVIAHYKGNSDIIMDEQMPIFGGYAGGIEETTIVDVATHINAVLMSSASWHLDGPVHIRWGSTNTRETLMIAGWACATISEFTDILSGNQYYPCAGPCTEMCLLEASAQSITDTASGREILSGVASAKGVVTDKTTGMEARMMGEVARATAGVEISEVNVILDKLVSLYEKNYASAPAGKTFQECYDVKTVTPTEEYMQVYDGARKKLEDLGLVF
dssp	-------HHHHHHHHHH-EE--HHHHH--HHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHH-EEE----EEE---HHHHHHHH-----EEEE--HHH-EEEE----------EEEE-----EE-HHHHHHHHHHHH------EEE--EE--E--E------HHHHHHHHHHHHHHHHHHHH-------EEE------HHHHH--E----E----EEEEE-E---EE-HHHHHHHHHHHH---EEEEE---EE------HHHHHHHHHHHHHHHHHH----EEEE--EE--------HHHHHHHHHHHHHHHHH----EEEE---------HHHHHHHHHHHHHHHHH---EEEE---HHH-------HHHHHHHHHHHHHH----HHHHHHHHHHHHH--------------HHHHEE----EE-HHHHHHHHHHHHHHHHH----
apssp	--------------------------HHHH-HHHHHHHHHHH------------HHHHHHHHHH-HHHHHH--EE-----EEEEE---HHHHHHHH-EEEEEE-----EEEEE----------EE-------------E---HHHHHHHHH-EEEEE-EEEEE----------HHHHHHHHHHHHHHHHHHH-----------------------------EE------HHHHHHHHHHHHHHEHHH------EEE--------------EEEEEEEEHHEHHHEE-----------EEEE------HHHHHHH-----EE-EE-EE-------------HHHHHHHHHHH---------HHE--------EEE-----HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHE--------EEEEEE-EEEE---HHHHHH-HHHHHHHHH-----	+3.1	+6.8	+0.06
apssp2	---------HHHHHHHH---------HHHH--HHHHHHHHH--------E----HHHHHHHHHHHHHHHHH---EE-----EEE--HHHHHHHHHHHHHHHEE-----HHEEHHH--------EE-------------EE-EHHHHHHHHHHHHHHHHHHHHH----------HHHHHH--HHHHHHHHHHH-----------------------------EE---HHHHHHHHHEEEHHHEEEEEE------EEE------E----------EEEEHHHHHHHEEE----EE----EEEEE------EEEEEEEEE--HHHHHHHHH----E-------HHEEEHH---HH-------HHHHHHHH----EE------HHHHHHHHHH------EHHHHHHHHHHHHHHHHHH---------HHHEE-------HHHHHHHHHHHHHHHHH-----	-13.3	-13.1	-0.23
jpred	-------------------------HHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHH---E----EEEEEE--HHHHHHHHH--EEEEE-----EEEEEE---------EE-----------------EEEHHHH----EEEEEEEEEE----------HHHHHHHHHHHHHHHHHHH--------------------EEE------EE-----HHHHHHHHH----EEEEEE------EEE--------------EEEEEEEEEEHHHHHEE----------EEEEE------EEEEEE---------------------------HHHHHHH-----------EEEEEEEE---EEEE-----HHHHHHHHHHHHH---EEEHHHHHHHHHHHHHHH------------EEEEEE-E---HHHHHHHHHHHHHHH------	-11.5	-10.8	-0.17
phd	---------HHHHHHHH------HHHHHHHHHHHHHHHHHHH---E-EEE----HHHHHHHHHHHHHHHHH--EEEE--EEEEE--HHHHHHHHHHHHEEEEE-E-----EEEE-E-------EEE----------E-----EE-HHHHHH---EEEEEEEEEE---------HHHHHHHHHHHHHHHHHHHH------E-----EE-----EEE------EE-------HHHHH------EEEEEEE-----EEE-----EEE------EEEEEE-HHHHHHHHHEEEEEE-----EEEEE----HHHHHHHHHHHHHE-------------E----HHHHHHHHHHHHHHHHH----EEEEEEEEEEEEEEEE----HHHHHHHHHHHHH--EEEEEE-HHHHHHHHHHH----------EEEEEEEEE----HHHHHHHHHHHHHHHHH-----	-6.1	-4.1	-0.06
phdpsi	---------HHHHHHHH------HHHHHHHHHHHHHHHHHHH---E-EEE----HHHHHHHHHHHHHHHHH--EEEE--EEEEE--HHHHHHHHHHHHEEEEE-E-----E------------EEE-------HHHH----HHHHHHHHHH---EE--E-------------HHHHHH---HHHHHHHHHHH------------EEEEE------------E---------E--EEE----EEEEEE------------------------EEEEEEEE-----EEEEEEEEEE--------------EEEEE--HHHHHH-------EE-EEE-------EEEEE---HHHHH-----EEEEEEEEEEEEEEEE----HHHHHHHHHHHHH--EEEEEE-HHHHHHHHHHH----------EEEEEEEEE----HHHHHHHHHHHHHHHHH-----	-10.1	-12.2	-0.12
prof_king	--------E-----------------------HHHHHHHHH-------------HHHHHHHHHHHHHHHHH---EEE---EEEE--HHHHHHHHH---EEEEE-----EEEHEHH-------EEEE--------------EEEEHHHHH----EEEE-EEEEE----------HHHHHHH-HHHHHHHHHHH-------------EEEE------E-----EE---------HHEE----EEEEEEEE-----EEEE----H---------EEEEEEEEEE-HHHEE---EEE----EEEEE-------EEEEE--HHHHHHHHHHHH------------HHHHHHH------------HHHHHHHHH---EEE-----HHHHHHHHHHHH---EEEEHHHHHHHHHHHHHHH---------HHHHH-----E---HHHHHHHH-HHHHHHH-----	-11.7	-7.1	-0.17
profsec	----------HHHHHHH-------HHHHH--HHHHHHHHHH------EEE----HHHHHHHHHHHHHHHHH---EE----HHH---HHHHHHHHHHHHHHHH------EEEEEEE--------EEE---------HHH---HHHHHHHHH---EEEE-EE------------HHHHH----HHHHHHHHHHH-------------EEE------------EEE------EEEEEEEEE---EEEEEEE------------------------EEEEEE------EEE---EEEE------------HHHHHHHH-HHHHHHHH------------------HHHHHHHHHHHH------EEEEEEEEEEEEEEE----HHHHHHHHHHHHH---EEEEEEEEEHHHHHHHHH-----------EEEE---EE----HHHHHHHHHHHHHHHH-----	-10.4	-13.5	-0.15
prospect	-----------HHHHHH--------HHHH---HHHHHHHHH-------EEE---HHHHHHHHHHHHHHHHH---EE----EEEE--HHHHHHHHHH----EEE-----HHHHH-------------------------------HHHHHHHHHHHHH-EEEEE----------HHHHHHHHHHHHHHHHHHH--------------------EEE-----------HHHHHHHH-----HHHHHHHH------EEE-----------------EEE-HHHHHHHHHHH---------EEEEEE----HHHHHH---HHHHHHHHHHH---------------HHHHHH-HHHH------HHHHHHH---EEEEE-------HHHHHHHHHH----EEEE---HHHHHHHHHHH-----------EE----------HHHHHH---HHHHHHH-----	-7.9	-9.0	-0.16
psipred	---------HHHHHHHH---------HHHH--HHHHHHHHHH------EE----HHHHHHHHHHHHHHHHH---EEE----EEE--HHHHHHHHHHHHHHHEE------EEEHHH----------------------EEEEEEHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHH----------------------------------HHHHHHHHHEEEEHHEEEEEEE------EEEE---------------EEEEEEHH--EEEEEE---EE----EEEEE------EEEEEEEEE--HHHHHHHHH------------HHEEEE------------HHHHHHHHH----EEE------HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH--------HHHHHH-------HHHHHHHHHHHHHHHHHH----	-16.4	-17.7	-0.25
samt99_sec	----------E--HHH---------HHHHH--HHHHHHHHHH------------HHHHHHHHHHHHHHHHH--EEE----EEEE--HHHHHHHHHHHHHHHE-------EEEE----------EE------------H---HHHHHHHHHHH-HHH--EEE------------HHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHHHHHHHHHH------EEE----------------EEEEHHHHHHHHHEE----EE----EEEEE------HHHHHHHHHHHHHHHHHHHH------------HHHHHHHH------------HHHH-------EE-------HHHHHHHHHHHH----HHHHHHHHHHHHHHHHH----------HHH----------HHHHHHHHHHHHHHHHH----	-4.7	-4.8	-0.12
sspro2	-----------HHH-------------HHH-HHHHHHHHHH-------------HHHHHHHHHHHHHHHHH---EE----EEEEE-HHHHHHHHHHHHHHHH-------EEEEE---------E-----------H-----HHHHHHHHH---HEE--EEEEE---------HHHHHHHHHHHHHHHHHHHH-------------EEE-----EE------------HHHHHHHH---HHHHHHHHH-----HHEE------E-------E--EEEEHHHHHHHHHHH---------EEEEE----HHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHH-H---------HHEH--EEE---E-------HHHHHHHHHHHHH---EEHHHHHHHHHHHHHHHHH----------EEEE--------HHHHHHHHHHHHHHHHH----	-6.7	-6.4	-0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva