EVA results for 1l1o:C

DATE : 2002_06_05
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17..
seq	NTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYIKATVMDVKPVDYREYGRRLVMSIRRSALM
dssp	---E--HHHHHHH--------EEEEEEEEEEEE-----EEEE--------E-EEE---EEEE----EEE----EEEEEEEEEE----EEEEEEEHHHHHHHH---HHHHHHH----HHHHHHHHHH----EEEEEEEEE-----EEEEEEEEE--HHHHHHHHHHHHHHHHH-
apssp	--HHHHHHHHHHH---------EEEEEEEEEEEE----E-----------EEEE-----EEEE----------EEEEEEEEEE-----EEEEEEHHHHHHHHH--HHHHHHHH---HHHHHHHHHHH-----EEEEEEEE----EEEEE------HHHHHHHHHHHHHHHH--	+3.1	+6.8	+0.06
apssp2	------HHHH------------EEEEEEEEEEE-----EE----------EEEE-----EEE----------EEEEEEEEEEE-----EEEEEEHHHHHHH----HHHHHHHHH--HHHHHHHHHHH----EEEEEEEEEE----EEEEE-----HHHHHHHHHHHHHHHH--	+9.7	+17.9	+0.23
jpred	----HHHHHHHH----------EEEEEEEEEEE-----------------EEEE-----EEEE----------EEEEEEEEE------EEEEEE--HHHHHH---HHHHHHHHH---HHHHHHHHHHH----EEEEEEE---EEEEEEEE-----HHHHHHHHHHHHHHH---	+7.4	+14.7	+0.18
phd	---HHHHHHHHHHH--------EEEEEEEEEEEE-------------HHHHH-------EEE----------EEEEEEEEEE-----EEEEEE-HHHHHHHHHHHHHHHHHH----HHHHHHHHHHH-----EEEEEEEE--EEEEEEEE------HHHHHHHHHHHHHHH--	+7.6	+10.3	+0.18
phdpsi	---HHHHHHHHHHH--------EEEEEEEEEEEE----EEE--------HHH-------EEE----------EEEEEEEEEEE-----EEEEE---HHHHHHHH-HHHHHH-------HHHHHHHHH---EEEEEEEEEE-E-EEEEEEEEE-----HHHHHHHHHHHHH---	+6.6	+15.5	+0.13
prof_king	-----EEEEEH-----------EEEEEEEEEEEE---EEEE---------EEEE----EEEEE----------EEEEEEEEEE----EEEEEEHHHHHHHHH---HHHHHH-----HHHHHHHHHHH---EEEEEEEEEE---EEEEEEEE-----HHHHHHHHHHHHHH---	+10.5	+17.6	+0.19
profsec	---HHHHHHHHHH---------EEEEEEEEEEEE---EEEEE--------EEEE-----EEE-----------EEEEEEEEEE-----EEEEEEHHHHHHHH---HHHHHHHH-----HHHHHHHHH---EEEEEEEEEEEEEEEEEEEEEEEE-HHHHHHHHHHHHHHHH--	+10.8	+10.8	+0.22
prospect	------HHHHHHHHH-------EEEEEEEEEEEE----EEE---------EEE-----EEEE-----------EEEEEEEEEE-----EEEEE-HHHHHHHH---HHHHHHHHHH-HHHHHHHHHHH---EEEEEEEEEE-----EEEEEE-----HHHHHHHHHHHHHH---	+13.6	+21.5	+0.29
psipred	------HHHHHH----------EEEEEEEEEEEE---EEE----------EEEE----EEEE----------EEEEEEEEEEE----EEEEEEEHHHHHHH----HHHHHHHHH--HHHHHHHHHHH----EEEEEEEEEE----EEEEE-----HHHHHHHHHHHHHHH---	+9.2	+15.3	+0.21
samt99_sec	---HHHHHHHHHH---------EEEEEEEEEEE-----EE----------EEEE-----EE-----------EEEEEEEEEEE-----EEEEEHHHHHHHHH---HHHHHHHHH--HHHHHHHHHHHH--EEEEEEEEEE---	+10.6	+18.3	+0.24
sspro2	---HHHHHHHHHH---------EEEEEEEEEEE-----EE-----H----EEE------EEE----------EEEEEEEEEEE-----EEEEE-HHHHHHHH---HHHHHHHHH--HHHHHHHHHHH----EEEEEEEEEEEEEEEEEEE-----HHHHHHHHHHHHHHHH--	+8.3	+10.1	+0.20

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva