EVA results for 1l0o:A

DATE : 2002_04_03
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14
seq	MRNEMHLQFSARSENESFARVTVAAFVAQLDPTMDELTEIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTVRDEGVGIPDIEEARQPLFTTKPELERSGMGFTIMENFMDEVIVESEVNKGTTVYLKKHIVKS
dssp	--EEEEEEE-----HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH------HHH-EEEEEEE---EEEEEEEE-------HHHHH-------HHH------HHHHHHH--E--EEEE---EEEE--EEE----
apssp	---EEEEEEHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHH--------EEEEEEEE---EEEEEEE-------HHHHH-----------------HHHHHH----EEEE------EEEEEEE-----
apssp2	---EEEEEEE---HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHE---------EEEEEEEEE--EEEEEEEE-------HHHH-----------------HHHHHHHH--EEEEE-----EEEEEEEEEE--	+8.3	+11.5	+0.18
jpred	---HHHHHHHHHHHHHHHHHHHH-HHHH-----HHHHHHHHHHHHHHHHHHHHHH-------EEEEEEE----EEEEEEE----------------------------EEEEE-----EEEEEE-----EEEEEEE-----	-5.4	-15.0	-0.10
phd	--EEEEEEEE-E-----EEEEEEEEEEEE-----HHHHHHHHHHHHHHHHHHHH-EE-----EEEEEEEEE--EEEEEEE--------HHHH-----------------EEHHHH----EEEE------EEEEEEEEEE--	-1.7	-4.1	+0.02
phdpsi	---EEEEEEE-----HHHHE-EE--EEE--------HHHHHHHHHHHHHHHHHHH-------EEEEEEEE---EEEEEEE-------HHHHHH-------------HHHHHHHHH----EEEE------EEEEEEEEE---	-1.6	+5.1	-0.00
prof_king	----EEEEEEE-HHHEEEEEEEE---H---------HHHHHHHHHHHHHHHHHH-------EEEEEEEEE---EEEEEEE--------HHHH---------------EEHHHHHHH--EEEEEEE----EEEEEEEE----	-1.6	-6.3	+0.01
profsec	---EEEEEEE-----HHHHEEEE-EEEE--------HHHHHHHHHHHHHHHHHHH-------EEEEEEEE---EEEEEEEE-------HHHHH--------------EEHHH------EEEEEE-----EEEEEEEEE---	-2.9	-0.0	-0.00
psipred	---EEEEEE---HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH--------EEEEEEEEE--EEEEEEEE-------HHHHHH--------------HHHHHHHHH--EEEEEE----EEEEEEEE----	+9.3	+10.7	+0.20
samt99_sec	---HHHHHHHHHHHHHHHHHHEEEEE----------HHHHHHHHHHHHHHHHHHH-------EEEEEEEE---EEEEEEE---------HHHH----------------HHHHHH---EEEEE------EEEEEEE-----	-5.9	-1.8	-0.10
sspro2	---EEEEEE---HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH-------EEEEEEEEE--EEEEEEE--------HHHHH---------------HHHHHHHHH--EEEEE-----EEEEEEEEE---	+7.9	+12.7	+0.17

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva