EVA results for 1koh:D

DATE : 2002_02_27
TYPE : sec
NRES : 172
HEADER : RNA BINDING PROTEIN
COMPND : 2 MOLECULE: TIP ASSOCIATING PROTEIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : D.N.HO, G.A.COBURN, Y.KANG, B.R.CULLEN, M.M.GEORGIADIS

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17.
seq	LNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTTLPP
dssp	-----HHHHHHHHHHHHH-------EEE---------HHH-------------HHHHHHHHH------EEE---------HHH--HHHH-----EEE---------HHHH--------EEE------------HHHHHHHHHHH-----EE--EE-----------------
apssp	-----HHHHHHHHHE-E--------------------HH------EHH----HHHHHHHHH----------------EE----HH---------E-----------------------------------------HHHHHH------HHH---------------------	-1.5	-13.9	-0.17
jpred	-------HHHHHHHH--------HHHHHH---------------EEEE------------------EEEEE-----------HHHHHH-----EEEE---------------------EEEE------------HHHHHHHHHH----------------------------	-0.6	-6.7	-0.10
phd	-----HHHHHHHHHHHHHH------E----------HHHH---EEEE--HHH-HHHHHHHHH----EEEEEE----HHHHHHHHHHHHHHHHHHEE---------------------EEEE------HHHHH---HHHHHHHHHHHHHHHH---------------------	+3.1	-6.9	+0.02
phdpsi	-----HHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHE--HHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHHHHHHHHHHEE--HHHHHHHHHHHHH-----EEEEE------------HHHHHHHHHHHHHHHH----------------------	-8.2	-5.9	-0.06
profsec	-----HHHHHHHHHHHHHH--HHHHHHHHHH------HHHHHHHHHH--HHHHHHHHHHHHH------EE------HHHHHHHHHHHHHHHHHHHEE-----HHHHHHHHHHH-----EEEE------------HHHHHHHHHH--HHHH----------------------	-6.4	+0.8	-0.05
psipred	-----HHHHHHHHHHHHH---HHHHHHHH------HHHHH------------HHHHHHHHHH-----EEEE----EEE----HHHHHHH-----EEE--------HHHHHHH-----EEEEE------------HHHHHHHHHH---------EE-----------------	+6.9	+11.3	+0.07
sspro2	-----HHHHHHHHHHHHHH--HHH----HHH----HHHH---EEEEE----HHHHHHHHHHHH----EEEE----------HHHHHHHH-----EEE--------HHHHHHH----HHHHHH------------HHHHHHHHHH-----H---------EEEE---------	-2.5	-4.2	-0.08

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva