EVA results for 1kkx:A

DATE : 2002_07_17
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10.
seq	NNKQYELFMKSLIENCKKRNMPLQSIPEIGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESIYFRILLPYERHMISQEGIKETQAKRI
dssp	---HHHHHHHHHHHHHHH-------------------HHHHHH-----HHHH---HHHHHHHHHH----HHHHHHHHHHHHHHHHHH---------------
apssp	----HHHHHHHHHHHH----------------HHHHHHHHHHHHH-------HHHHHHHHHHHHHHH-HHHHHHHHHHHHH---HHH------HHHHH----	+6.5	+19.8	+0.20
apssp2	--HHHHHHHHHHHHHHHH--------------E--HHHHHHHHHH---HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH----HHHHHHH--	+6.7	-3.6	+0.09
jpred	----HHHHHHHHHHHHHH--------------HHHHHHHHHHHHH---HHHH----HHHHHHHH-----HHHHHHHHHHHHHHHHHHHH-------------	+15.3	+28.6	+0.16
phd	---HHHHHHHHHHHHHHHH---------------HHHHHHHHHHH---------HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH----HHHHH---	+11.5	+8.3	+0.05
phdpsi	---HHHHHHHHHHHHHHHH---------------HHHHHHHHHHH---------HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH----HHHHH---	+8.8	+6.0	+0.01
prof_king	--HHHHHHHHHHHHHHHH-----------------HHHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH----HHHHH---	+8.1	+6.1	+0.04
profsec	--HHHHHHHHHHHHHHHH-----------------HHHHHHHHHH----EEEE---HHHHHHHH-----HHHHHHHHHHHHHHHHHHH------HHHHHH--	+6.1	+7.2	0.00
prospect	--HHHHHHHHHHHHHHHH-----------------HHHHHHHHHH---EEEEE-HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH-	+4.6	+3.3	+0.02
psipred	--HHHHHHHHHHHHHHHH-----------------HHHHHHHHHH---HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH----HHHH-----	+10.5	+5.5	+0.16
samt99_sec	--HHHHHHHHHHHHHHHHH-------------EE-HHHHHHHHHHH----HE-HHHHHHHHHHHH-----HHHHHHHHHHHH-HHHHHH--------HHHHH	+2.8	+1.3	-0.06
sspro2	--HHHHHHHHHHHHHHHH-----------------HHHHHHHHHHH--HHHH--HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH---HHHHH---	+8.9	+9.2	+0.07

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva