EVA results for 1kh2:A

DATE : 2002_04_03
TYPE : sec
NRES : 380
HEADER : LIGASE
COMPND : 2 MOLECULE: ARGININOSUCCINATE SYNTHETASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS;
AUTHOR : M.GOTO, Y.NAKAJIMA, K.HIROTSU

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,
seq	MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVP
dssp	-EEEEE----HHHHHHHHHHHHHH--EEEEEEEE------HHHHHHHHHHH---EEEEEE-HHHHHHH-HHHHHH----E---E-------HHHHHHHHHHHHHHH---EEE--------HHHHHHHHHHHH----EEE-HHHH-----HHHHHHHHHH------
apssp	-EEEEEE----HHHHHHHHHHHH---EEEEEEE-------HHHHHHHHHHH----EHHE-HHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHH----EE----------HHHHHHEHHH-----EEE---HHHH----HHHHHHHHH------	+9.4	+7.0	+0.12
apssp2	-EEEEEE----HHHHHHHHHHHH---EEEEEEEE---HHHHHHHHHHHHHH----EEEEE-HHHHHHHHHHHHHH---EEE-----------HHHHHHHHHHHHH---EEEE---------HHHHHHHHHHH----EEE-EEE------HHHHHHHHHH------	+4.8	+9.8	+0.05
jpred	--EEEEE----HHHHHHHHHHHH----EEEEEE-------HHHHHHHHHHH---EEEEHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHH---EEEE----------EEHHHHHH------EEEE---------HHHHHHHHHH------	+9.8	+13.2	+0.14
phd	-EEEEEE---HHHHHHHHHHHHH---EEEEEEEE------HHHHHHHHHH-----EEE-HHHHHHHHHHHHHHHHH--EE----------HHHHHHHHHHHHHHHH---EEE---------HHHHHHEEEE-----EEE----------HHHHHHHHHH----EE	+15.5	+18.5	+0.26
phdpsi	-EEEEEE----HHHHHHHHHHHH---EEEEEEEE-----HHHHHHHHHHH----EEEEE-HHHHHHHHHHHHHHHH--EEE------HHHHHHHHHHHHHHHHHHH---EEE---------HHHHHHHHHH-----EEE----------HHHHHHHHHH------	+12.1	+17.1	+0.25
profsec	-EEEEEE-----HHHHHHHHHHH---EEEEEEEE-----HHHHHHHHHHH----EEEEE-HHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHH---EEEE--------HHHHHHHHHH-----EEEE---------HHHHHHHHHH------	+8.7	+12.2	+0.18
psipred	-EEEEE------HHHHHHHHHHH---EEEEEEEE---HHHHHHHHHHHHHH----EEEEE-HHHHHHHHHHHHHH---EEE-----------HHHHHHHHHHHHH----EEEE--------HHHHHHHHH------EEEEEEHH-----HHHHHHHHHH------	+10.4	+16.9	+0.19
sspro2	-EEEEEE-----HHHHHHHHHHH---EEEEEEEE----HHHHHHHHHHHHH---EEEEE-HHHHHHHHHHHHHHHH---E--------HHHHHHHHHHHHHHHHH----EEEE--------HHHHHHHHHH-----EEE----------HHHHHHHHHH------	+9.3	+15.3	+0.2

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Apr 10, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva