EVA results for 1kg0:C

DATE : 2002_03_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,.
seq	HTFQVPQNYTKANCTYCNTREYTFSYKGCCFYFTKKKHTWNGCFQACAEKYPCTYFYGPTPDILPVVTRNLNAIESLWVGVYRVGEGNWTSLDGGTFKVYQIFGSHCTYVSKFSTVPVSHHECSFLKPCLCVSQRS
dssp	--------------E--------EEE--EEEEE----E---HHHHHHHHH----EE-------HHHHHH-------EE--EEE-----EEE--------E-------EEE-------EE-------E-EEEEEE--
apssp	--------------EE-----EEE-----EEEEE---------HHHH-------EE-------EEEEEHHH-HHHHEEEEEEEE-----E------EEEEEEE---EEEE------E-------------EHH---
apssp2	-E------------EEE---EEEEEE---EEEE------HHHHHHHHH-----EEEE-------HHHHHHHHHH-EEEEEEEE-----EEEE----EEEEEE---EEEEEE--E-EEEEEEE------EEEEE---	-4.0	-6.4	-0.02
jpred	---EE------------------------EEEEE-------HHHHHHH-----EEEEE--HHHHHHHHHH-----EEEEEEE------EEE---------E-----EEEEE----------------EEEEE----	+3.6	-4.3	+0.01
phd	-------------------EEEEEEE--EEEEEEEE-----HHHHHHH-----EEEE---HHHHHHHHHH-----EEEEEEEE-----EEEE-----EEEEEE--EEEEEEEE--E-------------EEEEE--	+3.6	+2.2	+0.07
phdpsi	--EEE-----------------EEEE-EEEEEEEE------HHHHHHHH----EEEEE--HHHHHHHHHHE-----EEEEEE------EEEE-----EEE-----EEEEEE----------------EEEEEEEE-	+3.9	-0.5	+0.07
profsec	--EEE----------------EEEEE--EEEEEE-----HHHHHHHHHH----EEEE---HHHHHHHHHH------EEEEEEE-----EEEE----EEEEEE---EEEEEE------EE--------EEEEEEE--	+2.6	+0.8	+0.07
psipred	-EE-----------EEE---EEEEEE---EEEE------HHHHHHHHH----EEEEE-------HHHHH------EEEEEEEE-----EEEE----EEEEEE---EEEEEE--EE--EEEEE------EEEEE---	-2.2	-3.2	0.00
samt99_sec	--EEEEE----------------EEE--EEEEEE-----HHHHHHHHHHH---EEEEE--HHHHHHHHHH-----EEEEEE-------EEEE--------------EEEEEE---------------EEEEE----	+1	-4.0	+0.05
sspro2	---EE---------EEE--EEEEEEE--EEEEEE-----HHHHHHHHHH----EEEE-------HHEHH-H----EEEEEEEE------------EEEEEEE----EEEEEE---------E------EEEEE---	-2.2	-7.1	-0.04

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva