EVA results for 1kd0:A

DATE : 2001_12_19
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41..
seq	XKIVDVLCTPGLTGFYFDDQRAIKKGAGHDGFTYTGSTVTEGFTQVRQKGESISVLLVLEDGQVAHGDCAAVQYSGAGGRDPLFLAKDFIPVIEKEIAPKLIGREITNFKPXAEEFDKXTVNGNRLHTAIRYGITQAILDAVAKTRKVTXAEVIRDEYNPGAEINAVPVFAQSGDDRYDNVDKXIIKEADVLPHALINNVEEKLGLKGEKLLEYVKWLRDRIIKLRVREDYAPIFHIDVYGTIGAAFDVDIKAXADYIQTLAEAAKPFHLRIEGPXDVEDRQKQXEAXRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHXVQIKTPDLGGVNNIADAIXYCKANGXGAYCGGTCNETNRSAEVTTNIGXACGARQVLAKPGXGVDEGXXIVKNEXNRVLALVGRRK
dssp	-EEEEEEEEEE----EEE-HHHHH---EEE--EEE-----------EEE--EEEEEEEE----EEEEEE----------------HHHHHHHHHHH-HHHH---E---HHHHHHHHHH-EE--EE--HHHHHHHHHHHHHHHHHHH---HHHHHHHHH----------EE--------HHHHHHHH----EEEE-----HHHHH----HHHHHHHHHHHHHHHHH--------EEEEE---HHHHH----HHHHHHHHHHHHHHH----EEEE-------HHHHHHHHHHHHHHHHHH---EEEEE------HHHHHHHHH-----EEEE-HHHH---HHHHHHHHHHHH---EEEE-------HHHHHHHHHHHHHH---EEE-------HHHHHHHHHHHHHHHHHHHHH-
apssp	---EEE-E------EHH-HHHHHHH------EEE---EEE---EEEE-----EEEEEEE----------E-EE--------HHHHH-----HHHHHHH-E-------------HH----------EHHHHHHHHHHHHHHHHHH----EE-EEE-----------EEEEEE--------------HHH------HHHE-HHHHH----HHHHHHHHHHHHHHHHHHHHH----EEEEE------HHHHHHHHH--HHHHHHHHHH-----E--------HHHHHHHHHHHHHHHH------EEEE-------HHEEEEEE------EEEEE----------HHHHH-HH-----EE-----------EEEEE---------E-EE---------EEEEE----HHHHHH----	-11.3	-10.4	-0.16
phd	--EEEEEE----------HHHHHHHH------EEEEEEEE---EEEE----EEEEEEEEE---------EEEEE-------HHHHHHHHHHHHHHHH-HHHH--EE------HHHH---------HHHHHHHHHHHHHHHHHHHHH--EEEEEE--------EEEEEEEEEE--------HHHHHHEE------HHHHHHHHHH----HHHHHHHHHHHHHHHHEEE------EEEEEE-E---------HHHHHHHHHHHHHHH---EEEEE----HHHHHHHHHHHHHHHHHH-------EEE-HHHH--HHHEEEEEE-----EEEEE-------HHHHHHHHHHHH-----EE-----------EEEE---------EEE-----------EEEE--HHHHHHHH----	-6.7	+0.5	-0.04
phdpsi	--EEEEEE----------HHHHHHH------EEEEE-----HHHHHH----EEEEEEEEE---E-----EEEEE-----HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH------------EHHHHHHHHHHHHHHHH---HHHHHHHH------E----EEE-----HHHHHHHHHHHH----HHHHHHHHHHH------HHHHHHHHHHHHHHHH-------EEEEEEEE----EE-------HHHHHHHHHHHHH---EEEE------HHHHHHHHHHHH---EEEEE--EEEE-------HHHHHHHHHHH---EEEEEE-----HHHHHHHHHHHHH---EEEEE------------EEEEEEE----EEEEE--------EEEE--HHHHHHHHH----	-5.2	+2.2	-0.07
prof_king	--EEEEEEE-----EEE--HHHHH-------EEEE-------HHHH-----EEEEEEEEE---EEE--EEEEEE---------EE-----HHHHHHH-HHH-----------HHH------------EEEEH--HHHHHHHHHHHH---EEEEEE------------EEEE-----HHH-HHHHHH---------HH--HHHH------HHHHHHHHHHHHHHH---------EEEEEEEEEHH-EE---HHHHHHHHHHHHHH-----EEEE--------HHHHHHHHHHHHHHHH----EEEEEE--------HHHH------EEEEEE---------HHHHHEEE-----EEEE----------EEEEEEEEEH--HHHHHH---------EEEEE----HHHHHHH---	-7.2	-2.0	-0.10
profsec	--EEEEEE-----------HHHHHH------EEEEE--------EEE-----EEEEEEEE---EEE--EEEEEE-------HHHHHHHHHHHHHHHHHHHHH--HHHH---HHHHH-HHH-----HHHHHHHHHHHHHHHHHHHH-----EEEEHHH----------EEEE------HHHHHHHHHHH-----HHHHHHHHHH----HHHHHHHHHHHHHHHHHH-------EEEEEEEE----EEE------HHHHHHHHHHHHH---EEE--------HHHHHHHHHHH---EEEEE--EEEE-------HHHHHHHHHHHH---EEEEE-----HHHHHHHHHHHHH----EEEE---------HHHHHHHHHHH----EEE--------HHHEE--HHHHHHHHH----	-5.1	-0.6	-0.08
sspro2	--EEEEEE----------HHHHHH--------EE----------EEE----EEEEEEEE----EEE---EEEEE-------HHHHHHHHHHHHHHHH-H-H-----H---H-HHHH---EE---HHHHHHHHHHHHHHHHHHHHH----EEEEEE--------E--EEEEEE-----HHHHHHHHHHH----HHHHHHHHHHH----HHHHHHHHHHHHHHHHHE--------EEEEEEEEEHEEEE---HHHHHHHHHHHHHH-----EEEE-------HHHHHHHHHHHHHHH------EEEEE--H------EHEE-------EEEEE------HHHHHHHHHHHHH-----------------EEEE-HHHHH--HHHHH--------HHHHHHHHHHHHHHHHH----	-5.8	-2.7	-0.13
jpred	--EEEEEE----------HHHHHHH------EEE---------EEEEE----EEEEEEE----EE----EEEEE--------HHHHH--HHHHHH-----------------HHHH---------HHHHHHHHHHHHHHHHHHHHH---EEEEEE-------------E--------HHHHHHHHHH------HHHHHHHHHHH----HHHHHHHHHHHHHHHHH--------EEEEEEE--EEEEE---HHHHHHHHHHHHHHH----EEE----------HHHHHHHHHHHHHH-----EEEEE--------EEEEE------EEEEEE---------HHHHHHHHH-----EE-----------EEEEEEE-------EEEE----------EEEEE--HHHHHHH----	-6.1	+0.2	-0.08

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva