EVA results for 1kbb:A

DATE : 2002_04_10
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41...,....42...,....43...,....44...,....45...,....46...,....47...,....48...,....49...,.
seq	XYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLTGLLDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAGSKPFIYQAVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGFVPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEHRWRQIRNMVIFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWSFSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESKL
dssp	-----------EEEEE----HHHHHHHHHH--------EEEE-----EE--------HHHHH-E------E--E-HHHHHHHHHHHHH---EEEEEE---EEEE-----E--E-----EE----EE----E-HHHE----------E------HHHHHH-EE--EEEE----HHHHHHHHHHHHHHHHH---EEEE--HHH--HHHHHHHH-----------------EEEE-----------HHHH----EEE-HHHHHHHHHHH-------HHHHHH--HHH----HHHEEE------HHH-----HHH---HHHHHHHHHHHHHHHH----EEEEEE-E-----EE--EE--------EE--EE----E-----E---E--HHH-HHHHHHHHHHHHH----EEEEEE----EEEEEE---EEEEEE-----EEEEEE-----EEEE------E----E---EEEE----EEEEEE-------EEEEEHHHE-
apssp	-----------EEEEE-----EEEHHHHHH--------EEEE-----EE--------HHHHH-E------E--E-HHHHHHHHHHHH----EEEE-E---EEEE-----E--E-----EE----EE----E-HHHE----------E------HHHHHH-EHHHEEEE----HHHHHHHHHHHHHHHHH---EEEE--HHH--HHHHHHHH-----------------EEEHH----------HHHH----EEE-HHHHHHHHHHH-------HHHHHH--HHH----HHHEEE--------------------HHHHHHHHHHHHHHHH----EEEEEE-E-----EE--EE--------EE--EE----E-----E---E--HHH-HHHHHHHHHHHH-----EEEEEE----EEEEEE---EEEEEE-----EEEEEE-----EEEE------E----E---EEEE----EEEEEE-------EEEEE---E-	+20.2	+23.9	+0.44
apssp2	-----------EEEEE----HHHHHHHHHH--------EEEE-----EE--------HHHHH-E------E--E-HHHHHHHHHHHHH---EEEEEE---EEEE-----E--E-----EE----EE----E-HHHE----------E------HHHHHH-E---EEEE----HHHHHHHHHHHHHHHHH---EEEE--HHH--HHHHHHHHH----------------EEEEEE---------HHHH----EEE-HHHHHHHHHHHH------HHHHHH--HHH----HHHEEE--------------------HHHHHHHHHHHHHHHH----EEEEEE-E-----E----E--------EE--EE----E-----E---E--HHH-HHHHHHHHHHHH-----EEEEEE----EEEEEE---EEEEEE-----EEEEEE-----EEEE------E----E---EEEE----EEEEEE-------EEEEE---E-	+14.1	+16.9	+0.33
jpred	-----------EEEEEE---HHHHHHHHHHH-------EEEE------------------------EE-------HHHHHHHHHHHH----EEEEEEEE-----------------------------------------------------------HHHH----------HHHHHHHHHHHHHHHHH----EEHHHHH----HHHHHHHHHH--------------EEEEEEE-----------------------HHHHHHHHH----HHHHHHH-------------EEEEEE--------------EEEE---HHHHHHHHHHHH---------EEEE----------------------------------------HHHHHHHHHHHHHHH-----------------EEEEE----EEEEEE-------EEE--------EEEEE-----------EEEEEE----EEEEE-------EEEEE-----	-2.2	-13.7	-0.03
phd	----------EEEEEEEEE--HHHHHHHHHH-----EEEEEE-------E--------EEEE---EEEEE-----HHHHHHHHHHHHH--EEEEEEEHHHH---------------------------------------------------------EEEE---------HHHHHHHHHHHHHHHHH-----EEHHHHHH--HHHHHHHHHHH--------------EEEEEEE------------E---EEEEEE--HHHHHHHH---HHHHHHHHH-----EEE----EEEEEE--------------EEEE----EEEEEEEEEEEE----EEEEEEEEE----------------------------------------HHHHHHHHHHHEEEEE---------------EEEEE----EEEEE----HHHHHHHH-------EEEEE------------EEEEE---EEEEEE-------EEEEEE----	-4.3	-11.7	-0.08
phdpsi	-----------EEEE---HHHHHHHHHHHHHHHH----EEEEE--------------------E---E-------HHHHHHHHHHHHH---EEEEEEE--------------------------------------------------------------------------HHHHHHHHHHHHHHHHH---HHHHHHHHHH-----HHHHHHHHHH----------EEEEEEEE------------------------HHHHHHHH---HHHHHHHHHH----------EEEEEEE----------------------HHHHHEEEEEEE------EEEEEEE--------------------------------------HHHHHHHHHHHHHHHHHHH----EEEEE-----EEEEE---EEEEEEE------EEEE---------EEEE----EE------EEEE----EEEEEEE------EEEEEEE---	-4.8	-16.5	-0.09
prof_king	-----------EEEEEEE--HHHHHHHHHHHH-----EEEEEE---------------EEE---EEEEE------HHHHHHHHHHHHH---EEEEEEEE-----------------EEE--------------------------------------EEEEE----------HHHHHHHHHHHHHHHHH----EEE--HH----HHHHHHHHHHH-------------EEEEEEE-----------------EEEE--HHHHHHHHH----HHHHHHHH------------EEEEEE--------------------HHHHHHHHHHHHH-------EEEEEEE-------------------------------------EEEHHHHHHHHHHHHHHH------EEEEE-----EEEEE---EEEEEEE-------EEEEE--------EEEE-EEEEEEEEEEEEEEE---EEEEEEE------EEEEEE----	-2.9	-10.1	-0.02
profsec	-----------EEEEE----HHHHHHHHHHHHHH----EEEEE-----------------------EEE------HHHHHHHHHHHHH---EEEEEEE--------------------------------------------------------------------------HHHHHHHHHHHHHHHHH---EEEE-HHHHH----HHHHHHHHHHH----------EEEEEEEE----------------EEEE----HHHHHHHHH--HHHHHHHHHH-----------EEEEEE--------------------HHHHHHHHHHHH---------EEEEEE-------------------------------------HHHHHHHHHHHHHHHHHHHH----EEEEEE----EEEEE---EEEEEEE-----EEEEEE-------EEEEE---EEE-----EEEEE----EEEEEEE------EEEEEE----	-3.4	-15.9	-0.04
psipred	----------EEEEEE----HHHHHHHHHHHHHHH---EEEE----------------------EEEEE------HHHHHHHHHHHHH---EEEEEE----------------------------------------------------------EEEE-------------HHHHHHHHHHHHHHHH----EEEE-HHHH--HHHHHHHHHHHHH------------EEEEEEE-----------------EE--HHHHHHHHHHH---HHHHHHHHH---------HH-EEEEE---------------------HHHHHHHHHHHHH--------EEE------------------------------------------HHHHHHHHHHHHHHHHH----EEEEEE----EEEEEEE--EEEEEEE-----EEEEEEE-----EEE-EE---EE-------EEEE----EEEEEE-------EEEEE-----	-1.3	-13.4	-0.03
sspro2	-----------EEEEEEE--HHHHHHHHHHHH-----EEEEE------EEE-------EEE----EEEE------HHHHHHHHHHHHH---EEEEEEEE----------------------------------------------EEE-----HHH-----E---HH-----HHHHHHHHHHHHHHHHH---EEEE-HHH---HHHHHHHHHHH--------------EEEEEEE--------HHHH-----EEEEHHHHHHHHHH----HHHHHHHHH------------EEEEEE--------------EEE---HHHHHHHHHHHHH----------------------------------------------------HHHHHHHHHHHHHHHHHHH-----H--------EEEE----EEEEEEE------H-E---------EE-EEE----------EEEEE----EEEEEE-------EEEEEE----	-3.2	-10.9	-0.05

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 1, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva