| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3....,.... |
| seq | PDKDFIVNPSDLVLDNKAALRDYLRQINEYFAIIGRPRF | | | |
| dssp | ------------------HHHHHHHHHHHHHHHHH---- | | | |
| apssp | -----E------EHH-HHHHHHHHHHHHHHHHHH----- | +3.1 | +6.8 | +0.06 |
| apssp2 | -----E--HHHHEE--HHHHHHHHHHHHHHHHHH----- | -0.2 | -24.9 | -0.01 |
| jpred | -----E----------HHHHHHHHHHHHHHHHH------ | +14.3 | +6.8 | +0.15 |
| phd | ----EEE--------HHHHHHHHHHHHHHHHHHH----- | +12.2 | +2.3 | +0.2 |
| phdpsi | ----EEE---------HHHHHHHHHHHHHHHHHH----- | +12.0 | +1.8 | +0.22 |
| profsec | ----EEE---------HHHHHHHHHHHHHHHHHH----- | +9.3 | -1.8 | +0.18 |
| prospect | -----EE--HHHHH--HHHHHHHHHHHHHHHH------- | -2.6 | -23.3 | -0.12 |
| psipred | --------HHHHEE--HHHHHHHHHHHHHHHHHH----- | +1.1 | -9.5 | -0.02 |
| samt99_sec | -----EE---------HHHHHHHHHHHHHHHHHH----- | +12.5 | +2.6 | +0.21 |
| sspro2 | ----EEE------E--HHHHHHHHHHHHHHHHHH----- | +7.7 | -17.3 | +0.18 |