EVA results for 1k8k:E

DATE : 2001_12_12
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17..
seq	PAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETKDTDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMNKSLS
dssp	------------EEE--EEE--E---------E------HHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHE------E-HHHH------HHH----
apssp	--------------E-----------------------HHHHHHHHHHHEEHHHHHHEE-----HHHHHHHHHHHHHHHHH------HHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHH-----------EEHHHHHHHH-----	+8.8	+15.5	+0.06
jpred	---------------------------------------HHHHHHHHHH--EEEE--E------HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHH-----	+8.3	+0.9	+0.13
phd	--------------------------------------HHHHHHHHHHHHHHHHHEEE------EEEEEEHHHHHHHHHHHH------HHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHH---	+4.6	+3.1	+0.05
phdpsi	------------------E-------------------HHHHHHHHHHHHHHHEEEEEE-----EEEEEEHHHHHHHHHHHHH----HHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHH---	+3.0	+6.4	+0.04
profsec	------------------EE------------------HHHHHHHHHHHH-EEEEEEEE-----EEEEEHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHH---	+1.7	+6.2	+0.01
samt99_sec	--HHHHH-----H------------------------HHHHHHHHHHHHH-HHE--------HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHH---	+4.7	+3.5	+0.04
sspro2	-------------E-------------------------HHHHHHHHHHHHHHHE-E----HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHH--	+8.7	+3.7	+0.11

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva