EVA results for 1k4n:A

DATE : 2002_08_14
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15.
seq	GHXIXANWQSIDELQDIASDLPRFIHALDELSRRLGLNITPLTADHISLRCHQNATAERWRRGFEQCGELLSENXINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTS
dssp	-------HHH-HHHHHHHHHHHHHHHHHHHHHHHH-------EEEEEEEE---HHHHHHHHHHH---EEEEEEEEE--EEEEEEEEEEEEEE--EEEEEEEEE----------EEEEEEEE----HHHHHHHHHH---HHHHH----EEEE-
apssp	------HHHHHHHHHHHH-HHHHHHHHHHHHHHH--------HHHHHHHEHHH-HHHHHHHHHHHHHHHH--------EEEEEEEE---HHH-EEEEE-EE-------------EEEEEEE----HHHHHHHHHHHH-----------E---	-8.2	-8.9	-0.11
apssp2	---E---HHHHHHHHHHHHH-HHHHHHHHHHHHHH-----HHHHHHHHHEE--HHHHHHHHHHHHHH-HHHHH------EEEEEEE---HHE---EEEEEE--------------EEEEEE-----HHHHHHHHHHHHH---------EEEE	-13.5	-14.2	-0.22
jpred	-------HHHHHHHHHHHHH-HHHHHHHHHHHHHH----------HHHHHH--HHHHHHHHHHHHHH-HHHH-------EEEEEE-----HHH---EEEEE---------------EEEEEE----HHHHHHHHHHHHHH-------EEEEE	-5.4	-1.2	-0.02
prof_king	---EEEE---HHHHHHHHHHHHHHHHHHHHHHHHH----------EEEEEE---HHHHHHHHHHHHH-HHHHHH-----EEEEEEE----EEEEEEEEEEE---------------EEEEEE----HHHHHHHHHHHHH--------EEEEE	-5.4	-1.0	-0.03
samt99_sec	---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHH--HEEEEE--HHHHHHHHHHHHHHHHHH-HHH----EEEEEEE---EEEE-EEEEEEEE-------------EEEEEEE----HHHHHHHHHHHHH-------EEEEE------EEEEE---EEEEE----HHHHHHHHH	-1.2	+4.6	0.00
sspro2	--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------EEEEE---HHHHHHHHHHHHHH--HH-HHHH----EEEEEE---EEEEEEEEEEEE--------------EEEEEE----HHHHHHHHHHHHHH-------------	-5.8	-5.5	-0.02

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva