EVA results for 1k2a:A

DATE : 2002_04_03
TYPE : sec
NRES : 136
HEADER : HYDROLASE
COMPND : 2 MOLECULE: EOSINOPHIL-DERIVED NEUROTOXIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : C.CHANG, D.L.NEWTON, S.M.RYBAK, A.WLODAWER

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,.
seq	HVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
dssp	--------HHHHHHHHH-------HHHHHHHHHHHH-----EEEEE---HHHHHHH-----E----------EEE----EEEEEEEEEE-----HHH-EEEEEEEEE-EEEEEEE-----------EEEEEEEEE-
apssp	------HHHHHHHHHHH-----HHHHHHHHH----------EEEEEE--HHHHHHHH-----E---------E------EEEEEE--------------EEEEEEEE-EEEEE-------------EEEEE-----	+3.3	+16.8	+0.07
apssp2	--------HHHHHHHHH-------HHHHHHHHHHHH-----EEEEE---HHHHHHH-----E----------EEE----EEEEEEEE-------HHH--EEEEEEEE-EEEEEEE-----------EEEEEEEEE-	+14.1	+19.4	+0.36
jpred	---------HHHHHHHH-------HHHHHHHH-----------EEEE-----EEEE-----------------------EEEEEEE--------------------EEEEEEE-------------EEEEE-----	-3.7	-2.4	-0.00
phd	--------HHHHHHHHH-----HHHHHHHHHH-----------EEE---HHHHHHHE----EEE---------------EEEEEE--------------EEE--EEEEEEEEE-----------------EEEE--	+6.5	+8.3	+0.17
phdpsi	---------HHHHHHHH-----HHHHHHHHHH-----------EEEE------EEEE----------------------EEEEEEE-------------EEE--EEEEEEEEE-----------------E-----	-5.4	-8.1	-0.04
prof_king	--------HHHHHHHH-------HHHHHHHH------------EEEE---HHHHHHH----------------E----EEEEEEEE--------------------EEEEEEE-------------EEEEEE----	-1.5	+7.5	+0.05
profsec	--------HHHHHHHHH-----HHHHHHHHHH-----------EEEE-----EEEEE----------------------EEEEEEE------------EEEE----EEEEEEE----------------EE-----	-6.8	-8.2	-0.06
psipred	--------HHHHHHHHH-----HHHHHHHHH------------EEE---HHHHHHH----------------EE-----EEEEEEEE------------EE----EEEEEEEEE------------EEEEE-----	+2.6	+2.8	+0.10
sspro2	--------HHHHHHHHH-----HHHHHHHHHHH-----------EE---HHHHHHH------E----------------EEEEE---------------E------EEEEEEE--------------EEEEE----	-3.1	-1.9	+0.05

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Apr 10, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva