EVA results for 1k1e:D

DATE : 2002_02_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....1
seq	LENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVFDTAQGFLKS
dssp	-----EEEEE--------EEEEE--EEEEEEEEHHHHHHHHHHHH---EEEEEE----HHHHHHHHHH---EEEE----HHHHHHHHHHHH---HHHEEEEE--HHHHHHHHH--EEEE-----HHHH----EE--------HHHHHHHHHHHH----HHHH-HHHH---
apssp	----EEEEEE---EE---EEE------HHHHEE------EE-EE----EEEEE-----HHHHHHHHHH-HHHHHH--EHHHHHHHHHHHHH------EEEE-------HHHHH----EEE-----E------EEEE------HHHHHHHHHHHH-----HHHHHHH----	-5.4	+1.1	-0.10
jpred	----EEEEE----EE-----EE----HHHHHHHHHHHHHHHHHHH---EEEEEE---HHHHHHHHHH---EEEEE----HHHHHHHHHHHH-----EEEEE------HHHHHH----EE-----HHHHHHHEEEEE----HHHHHHHHHHHHHHH---HHHHHHH-----	+2.6	+9.2	+0.01
phd	----EEEEEE---------EE------HHHHEEE---HHHHHHHHHHHEEE------HHHHHHHHHHH-HHHHH-----HHHHHHHHHHHHHH----EEEE-------HHHH----EEEEE--HHHHHHH--EEE-------HHHHHHHHHHHH-----HHHHHHHHH--	+2.2	+10.7	+0.03
phdpsi	---EEEEEEEE-------EEEEE------------HHHHHHHHHH---EEEEE----HHHHHHHHHH----HHH-----HHHHHHHHHHHH-----EEEEE----HHHHHHHHH----E---HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH--	-2.1	+0.4	-0.00
profsec	---EEEEEEEE--EE---EEEEE------------HHHHHHHHHH---EEEEE----HHHHHHHHHH----EEE-----HHHHHHHHHHHH-----EEEEE------HHHHHH----EEE---HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH--	-3.2	-2.1	-0.02
psipred	---EEEEEE---EEEE--EEEE----EEEEEEE---HHHHHHHHH---EEEEEE---HHHHHHHHHH---EEEE-----HHHHHHHHHHHH---HHHEEEE-----HHHHHHH---EEE-----HHHHHH--EEE-----HHHHHHHHHHHHHHH-HHHHHHH-------	+3.2	+11.5	+0.09
samt99_sec	HH-EEEEEE----EE-----E----HHHHHHH----HHHHHHHHHH--EEEEE----HHHHHHHHHHH---EEEE----HHHHHHHHHHHH-----EEEEE----HHHHHHHHH---EEH----HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH	-6.3	-4.6	-0.09
sspro2	--EEEEEEEE---E----EEEE-----EEEEE-HHHHHHHHHHHH---EEEEEE---HHHHHHHHHH----EEEE----HHHHHHHHHHH----HHHEEEE------HHHHHHH---------HHHHHHHHHHHHHH---HHHHHHHHHHHHHH-----HHHHHHHH---	+2.4	+6.5	+0.05

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva