EVA results for 1jyh:A

DATE : 2002_04_10
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,
seq	MNYEIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVPKEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTLPENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPK
dssp	---EEEEE--EEEEEEEEE--HHHHHHHHHHHHHHHHHH------EEEEEE--------HHH-EEEEEEEE-------------EEEEE--EEEEEEEEEE-----HHHHHHHHHHH-----EEE----EEEEE---HHHH--EEEEEEEEEEE-
apssp	--HHHHHHH--EEEE-EEE---HHHHHHHHHHHHHEE--------EEEEEEE--------------EEEEE--EEE-------EEEEEE----EEEEEHHEE-------HHHHHHHHHHHHHHH-----EEEEE---------EEEEEEEE----
apssp2	----E------EEEEEEEE--HHHHHHHHHHHHHHHHHH-----HHEEEEEE------HHHH----EEEEE------------EEEEE----EEEEEEEEEE------HHHHHHHHHH------------EEEEE--------EEEEEEE-----	+4.7	+13.8	+0.12
jpred	--------------EEE-----HHHHHHHHHHEEEEE---------EEEEEE--------------EEEE-------------EEEEEE----EEEEEE---------HHHHHHHHH-------------EEEE---------EEEEEEEE----	-2.5	+3.4	+0.03
phd	------HHHHHHEEE-E-----HHHHHHHHHHHEEEE-----EE-EEEEEEE--------------EEEEEE--E---------EEEE----HHHHHHHH-------HHHHHHHHHHHHHHHHHH-----EEHHHH-------EEEEEEEEEE--	-8.5	-9.1	-0.11
phdpsi	--EEEEE---EEEEEEEEE----HHHHHHHHHHHHHHHH-------EEEEEE----------EEEEEEEEE------------EEEEE----EEEEEEEE---HHHHHHHHHHHHHHH-----------EEEEE-----------EEEEEEEE--	+9.3	+17.0	+0.19
prof_king	---EEEE----EEEEEE-----HHHHHHHHHHHHHHHH-------EEEEEEE---------EEEEEEEEEE------------EEEEEE---EEEEEEE------HHHHHHHHHHHH------------EEEEEE--------EEEEEEEE----	+9.3	+16.8	+0.20
profsec	--EEEEE---EEEEEEEEE---HHHHHHHHHHHHHHHHH-------EEEEEE----------EEEEEEEEE------------EEEEEE---EEEEEEEE--HHHHHHHHHHHHHHH------------EEEEE----------EEEEEEEE---	+7.9	+13.5	+0.17
psipred	---EEEEE---EEEEEEE---HHHHHHHHHHHHHHHHHH-------EEEEE--------HHH----EEEE--------------EE-------EEEEEEEE-HHHHHHHHHHHHHHHH-----------EEEEE-------HHHEEEEE------	+3.6	+8.3	+0.15
samt99_sec	---EEE-----EEEEEE-----HHHHHHHHHHHHHHHHHH-----EEEEEE--------HHHHH--EEEEE------------EEEEE-----EEEEEEE--HHHHHHHHHHHHHHH------------EEEEEE---------EEEEEEE----	+4.7	+14.2	+0.14
sspro2	---EEE-HH-EEEEE------HHHHHHHHHHHHHHHH--------EEEEEEE--------HH-----EEE----EE-------EEEEEE----EEEEEEEEE----HHHHHHHHHHHHHH-HHHH-----EEEEE--------EEEEEEEEE---	+1.7	+8.8	+0.03

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva