EVA results for 1jy1:A

DATE : 2002_02_20
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....
seq	LEDPGEGQDIWDXLDKGNPFQFYLTRVSGVKPKYNSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAHLHAQAKPYENISLCQAKLDIAFGTHHTKXXLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLSPLYPRIADGTHKSGESPTHFKANLISYLTAYNAPSLKEWIDVIHKHDLSETNVYLIGSTPGRFQGSQKDNWGHFRLKKLLKDHAAESWPVVGQFSSVGSLGADESKWLCSEFKESXLTLGSVPLYLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKWSAETSGRSNAXPHIKTYXRPSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLXIRSYELGV
dssp	---------HHH---------EEEE------HHHH---E-HHHH--HHH--EEEEEEE---E-HHHHHHH--HHH----EEEEE---HHHHHHHHHHH-----EEEEE---------E---EEEEEE---EEEEEE---E-HHHH---E-EEEE---E-E--------------HHHHHHHHHH----HHHHHHHHHHH-E-------EEEEE--EEEEHHHHHH-HHHHHHHHHHHH------EEEE---E--------------HHHHH-------EEEE--EHHHHH-----HHHHHH----HHHH---HHHHHHEE----HHH------E--EEEEEE-----EEEEEEEE---E-HHHH-EEE----EEEE--EEEEE
apssp	----------E--------EEEEEEEE-----------EHHHH-------EEE-------E-HHHHH------------EEEE---HHHHHHHHHHH------HHHHHHHHHHH-----HHHHHHHHH---EEEEE----E----------EE---------------------EHHHHHHHHHH------HHHEEEE---------EEEE---------------HHHHHHHHHHH-------E---E-----------HHHHHHHH----------EEEE-----EEE--------------HHHHHHHHHHHHH------------------------------EE-EE----HHHHHHHHHHHH------E-HHHH--E
jpred	---------------------EEEEE-----------HHHHHHH------HHHHHHHHHHHHHHHHHHHH---------EEEEE------HHHHHHHHH----EEEEE-------------EEEEE----EEEEEE--------------EEEE----------------------HHHHHHHHHH----HHHHHHHHHH-------EEEEEE---------------HHHHHHHHH------EEEEEE-------HHHHHHHHHHH-----------EEEEE---HHHH--------------------HHHHHHHHHHHHHHH------------EE--------EEEEEEEE----HHHHHHH-------EEEEE----E	-5.2	-8.9	-0.07
phd	--------HHHHHH------EEEEEEE-------------EHHHHHH----EEEE-----EEEHHHHHHH--HHH-----EEE---HHHHHHHHHHH-------HHHHHHHHHHH-HHHHHHHHHHHHH--EEEEEE-------HHH----EEE------------------HHHHHHHHHHHHHH---HHHHHHHHHHH------EEEEEE-------------HHHHHHHHHHHHHH-----EEEEEEE-------HHHHHHHHHHH--EEE---EEEEEE---HHHHHHH----------HHHHHHHHHHHHHHHH--E------------HHHH------HHHHHHHHHHHHHHHHHHHHHHHHH---EEEEEE----E	-11.8	-10.3	-0.14
phdpsi	-------HHHHHHHHH----EEEEEE--------------EHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--------EEEEEE-----HHHHHHHH------EEEEEE-------HHHHHHEEEEE---EEEEEE--------------EEEE-------------------HHHHHHHHHHHHH----HHHHHHHHHH-----EEEEEEEE-------------HHHHHHHHHHHH------EEEEEEE-------HHHHHHHH------------EEEEEE--HHHH---------------------HHHHHHHHHHHHHH----------HHHEEE-------EEEEEEE---HHHHHHHHHHH----EEEEE----E	-6.7	-7.7	-0.09
prof_king	-----------HH-------EEEEEE--------------HHHHHHHH---HHHEEEEEEEEEHHHHHH----------EEEEE------HHHHHHHH-----EEEEEE------------EEEEEE---EEEEEE--------------EEEE---------------------HHHHHHHHHHH----HHHHHHHHH-------EEEEEE---------------HHHHHHHHHH------EEEEEE---------HHHHHHHH-HHH--------EEEEEE---------------------------HHHHHHHHHHHHH-----------HHH---------EEEEEEEE-----HHHHHHH-----EEEEEEE---E	-3.7	-7.5	-0.04
profsec	--------HHHHHHH-----EEEEEE--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------EEEEE-----HHHHHHHH------EEEEEE-------------EEEEE----EEEEEE-------------EEEE-------------------HHHHHHHHHHHH-----HHHHHHHHHH------EEEEEEE--------------HHHHHHHHHHH------EEEEE---------HHHHHHHH------------EEEEE-----EE------------------HHHHHHHHHHHHHHHHHH-----------EEE-------EEEEEEEE---HHHHHHHHHH----EEEEEEEE-EE	-6.3	-12.6	-0.10
psipred	-------HHHHHHHH-----EEEEEE--------------HHHHHHHHHHHHHHHHHHHHEEEHHHHHHH---------EEEEE-------HHHHHHH-----EEEEEEE-----------EEEEE-----EEEEE------HH------EEEE----------------------HHHHHHHHH-----HHHHHHHHH---HHHHHEEEEEE---------------HHHHHHHHHH------EEEEE---------HHHHHHH---HHH--------EEEE--HHHHHHHH-----------------HHHHHHHHHHHHHHHH---------EEEE--------EEEEEEEEE-----HHEEEE-----EEEEEE--EEE	-7.0	-10.6	-0.11
samt99_sec	-----HHH------------EEEE--------------EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------EEEEE------HHHHHHHH------EEEEE------------HEEEEE----EEEEEE---H--HHH------EEE---------------------HHHHHHHHHHH----HHHHHHHHHH--HHH--EEEEEE--------------HHHHHHHHHHHH	-3.6	-6.9	-0.04
sspro2	---------HHHHHH------EEEEE--------------HHHHH------HHHHEHHHHHHHHHHHHHH---------EEEEE--------HHHHH------EEEEE------------EEEEEE-----EEEEE------HHH-----EEEE---------------------HHHHHHHHHHH----HHHHHHHHHH--HHHHHEEEEE---------------HHHHHHHHH--------EEEEE---------HHHHHHHH-------------EEEE---HH--------------------HHHHHHHHHHHHH--------------EEEEE-------EEEEEEEE---H-HHHHHHH-----EEEEEEEEEEE	-5.4	-6.3	-0.07

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva