EVA results for 1jt5:A

DATE : 2001_12_19
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14.
seq	HHHHHFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTDGLVYGSQTPNEECLFLERLEENHYNTYISKKHAEKNWFLGLKKNGSCKRGPRTHYGQKAILFLPLPV
dssp	----------------EEEEE----EEEEE-----EEEE---------EEEEE----EEEEEE-----EEEE-----EEEE----HHH-EEEEEE---EEEEEE---HHH--E--E-----E--HHH---------EEEEE-
apssp	----------------EEEEE-----EEEE-----EEEE---------EEEEEEE--EEEEEE-----EEEE-----EE----------E------------EE-------EEEEE-----E------------E-EE----	+7.9	+6.9	+0.03
jpred	-------------------------EEEEE----------------EEEEEEE----EEEEEE---EEEEEE-----EE--------EEEEEEE------EEEEEE-----EEEEE------------------EEE-----	-1.9	-7.5	-0.15
phd	----------------EEEEE-----EEEEE------------HHHHEEEEE----EEEEEEE----EEEEE----EEEE----HHHHHHHHHHHHHH--EEEEHHHHHHEEE-------------------EEEEEE----	-3.0	-2.3	-0.06
phdpsi	-----E--------EEEEEEEE--EEEEEEE----E----------EEEEEEEE--EEEEEEE---EEEEEE--EEEEEEE--------EEEEEE-----EEEEEEE---EEEEEE--------------------E-----	-2.9	-6.8	-0.08
prof_king	---------------EEEEEE----EEEEEE----EEEEE-----EEEEEEEEE--EEEEEEE---EEEEEE----EEEE------EEEEEEEEE-----EEEEEE----EEEEEEE---------------EEEEEEE---	-1.1	+3.8	-0.09
profsec	-------------EEEEEEEEE---EEEEEE----EE--------EEEEEEEEE---EEEEEE---EEEEEE----EEEEE------EEEEEEEE----EEEEEEEE---EEEEEE------------------EEE-----	-3.8	+0.2	-0.12
sspro2	----------------EEEEEE---EEEEE-----E----------EEEEEEE----EEEEEEEE--EEEEE----EEEE-----H--EEEEEEE----EEEEEE-----EEEEEE-----------------EEEE-----	-0.4	+2.3	-0.09

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva