EVA results for 1jro:B

DATE : 2002_01_16
TYPE : sec
NRES : 759
HEADER : OXIDOREDUCTASE
COMPND : 2 MOLECULE: XANTHINE DEHYDROGENASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: RHODOBACTER CAPSULATUS;
AUTHOR : J.J.TRUGLIO, K.THEIS, S.LEIMKUHLER, R.RAPPA, K.V.RAJAGOPALAN,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....3
seq	SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAAHLAEGCFEIGGQEHFYLEGQAALALPAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPK
dssp	----------HHHHH------HHH-------EEEEEEE-----EEEEEEE-HHHH----EEEEE-HHH--------------------EE-----EEEEEEE--HHHHHHHH---EEEEEE------HHHHHHH--E-----EEEEE--HHHHHH---EEEEEEEEE--E--------EEEEEEE--EEEEEE----HHHHHHHHHHHH---HHHEEEEE-------------HHHHHHHHHHHHHHH---EEEE--HHHHHHH---E--EEEEEEEEE-----EEEEEEEEEEEEE-----HHHHHHHHHHH----E---EEEEEEEEEE-------------HHHHHHHHHHHHHHHHHH----HHHHHHHHE-----
apssp	-----------HHH----EEE---------HHH-EEE-------HH----HHHHH-----EEEEE-----------------EEE----EEEE--EEEEEEHHHHHHHHHHHHHHHHH------HHHHHHHHHH--------EEEE------HH-----EEEEEEE-----HHE----HHEEE-----EEEEE-----HHHHHHHHHH-------EEEEE-E------------HHHHHHHHHHHHH----EEEEE-------E------HHHEEEEEE-----EE-E---HH-----------HHHHHHHHH--------------EEEE--------E-------HHHHHHHHHHHHHHH----HHHHHHHE------	-2.9	-1.1	-0.07
jpred	------------------EEE-----------EEEEEE------EEE------------EEEEEEE-----------------------EEE---EEEEEE---HHHHHHHHHHHHHHH-----HHHHHHHHH-----------------HHHH----EEEEEEEE-------------EEEE-----EEEEEE----HHHHHHHHHHH------EEEEEE-------------HHHHHHHHHHHHH----EEEEE------E--------EEEEEEEE-----EEEEEEEEE----------HHHHHHHHHHH---------EE-EEEEE----------------HHHHHHHHHHHHHHH----HHHHHHHHH-----	+2.8	+6.6	+0.05
phd	------------HHHHHHHHH----------HHHH---HHHHHHHHH-------------EEEEE-------------------EEEEEEEEE--EEEEEE---HHHHHHHHHHHHHH------HHHHHHHHHH--------EEEE---HHHHHHHHHHHHHHHEE------HHHHHHHHHHHH----EEEEE-----HHHHHHHHHHH-HHH--E--EEHHH----------HHHHHHHHHHHHHHH---------------EEE----EEEEEEE------------EEHHH----EE-----HHHHHHH----------E-E-----------------------HHHHHHHHHHHHHHH---HHHHHHHHH-----	-7.6	-5.2	-0.07
phdpsi	----------------E-EEE---------EEEEEEEE-----EEEEE------------EEEEEE-----------------------EEEE--EEEEEE---HHHHHHHHHHHHHEE--------HHHHHH----------------HHHHHHHHHHEEEEEEE------------EEEEEE----EEEEE-----HHHHHHHHHHH------EEEEEE------HHHHH--HHHHHHHHHHHHHH----EEE---HHHHHH--------EEEEEEE----EEEEEEEEEE--------------HHHHHH----E---EEEE-EEEEE---------------HHHHHHHHHHHHHHHHH---HHHHHHHH------	+3.8	+6.9	+0.09
prof_king	----------HHHH----EEEE--------EEEEEEEE-----EEEEE----HHH-----EEEEE-----------------EEE---EEEEE--EEEEEE----HHHHHHHHEEEEEE-----E--HHHHH------------EE----HHHHH----EEEEEEE----E-------EEEEEE---EEEEEEE----HHHHHHHHHHH-----EEEEEEEE-------------HHHHHHHHHHHH----EEEEEE----EE-------EEEEEEEEE-----EEEEEEEEEE-----------HHHHHHHH---------EEEEEEEEE-------EEE-----HHHHHHHHHHHHHHHH----HHHHHHHH------	+4.7	+9.7	+0.13
profsec	--------------EEEEEEEE---------EEEEEEE-----EEEEEE-HHHHH----EEEEEE-------------------EE--EEEEE--EEEEEEE--HHHHHHHHHHHHEEE--------HHHHH-----------------HHHHHHHH--EEEEEEE------------EEEEEE---EEEEEE-----HHHHHHHHHHH------EEEEEE-------------HHHHHHHHHHHHHH---EEEEE--HHHHHH-------EEEEEEEE----EEEEEEEEE-------------HHHHHHHH----EE--EEEEEEEEEEE--------------HHHHHHHHHHHHHHHHH---HHHHHHHH------	+4.5	+8.7	+0.10
psipred	----------HHHH-----EEEEEE-----EEEEEEE------EEEEEE-HHHHH-----EEEE-HHH---------------------EEE---EEEEEEE--HHHHHHHHHH-------------HHHHH----------EE-----HHHHHH---EEEEEEEE------------EEEEEEE--EEEEEE----HHHHHHHHHHHH------EEEEE---------------HHHHHHHHHHHH----EEEEE-HHHHHH-------EEEEEEEEE-----EEEEEEEEEEE----------HHHHHHHH--------EEEEEEEEE---------------HHHHHHHHHHHHHHHHHH---HHHHHHHH------	+10.1	+16.5	+0.20
sspro2	--------HHHHHHH---EEE----------EEEEEEE------EEEE--HHHHH----EEEEEE------------------HE----EEE---EEEEEEE--HHHHHHHHH--EEEE----EEE-HHHHH----------EEE----HHHHHHH--EEEEEEEE------------EEEEE-----EEEEE----HHHHHHHHHHHH------EEEEE--------------HHHHHHHHHHHHHH---EEEEEE-----EE------EEEEEEEEE----EEEEEEEEEEE-----------HHHHHHHH---------EEEEEEEEEE-------------HHHHHHHHHHHHHHHHHH---HHHHHHHH------	+5.1	+10.1	+0.11

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 16, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva