EVA results for 1joj:A

DATE : 2001_12_19
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,..
seq	ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
dssp	---EEEEEEE-------------EEEEEE------EEEE-------EEEEEEEEE----EEEEEEE------EEEEEE--HHH----EEEEEEEEEE-----EEEEEEEEEEEEEEE-----EEEEEEEE--E------EEEEE--EEEE-EEEE---E-----E---EEEEEEE---EE-----EEEEEEEEEEEEEEE--------EEEEEEEE----------HHH--------
apssp	----EEEEEE-------------EEEEEE------EEEE--------EEEEEEEE----EEEEEEE------EEEEEE---------EEEEEEEEE--------EE--EEEEEEEE-------EEEEEEE---------EEEEE--E------EE---E-----E----EEEEEE---EE--------EEEEEEEEEE-----------EEEEEE----------------------	+16.8	+20.7	+0.27
jpred	---EEEEEE---------------EEEEE---------EEE------EEEEEEE-----EEEEEEE------EEEEEE---------EEEEEEE----------EEEEEEEE-------------EEEEE---------EEEE----------EEEEEE------------EEEE----EE------EEE-E-EEEEEEE---------EEEEEE-------------EEEE-----	+3.4	+4.1	-0.05
phd	--EEEEEEE---------------EEEEEEEEE---HHHHHHH-----EEEEEEE----EEEEEEEE------EEEEEE--------EEEEEEEE----E----EEEEEEEEEE-E----HHHHHHHHHHHHH-HHH---EEE----------EEEEEE------------EEEEE--EEEEEEEE-EEEEE--EEEEEE---------EEEEEE-------------EEEEE----	-3.9	-5.6	-0.10
phdpsi	---EEEEEEE--------------EEEEE-------EEEEE-----EEEEEEEE----EEEEEEEE------EEEEEE--HHHH---EEEEEEEE------EEEEEEEEEEEEEE----------EEEEEE-------EEEEEEEEEEE---EEEEEE--------------EEE----EEEE------EEEEEEEEEEEE--------EEEEEE-------------EEEE-----	+5.6	+15.7	0.00
prof_king	--EEEEEEEE-------------EEEEEE--EEEEEEEEEEEE---EEEEEEEE----EEEEEEEEE-----EEEEEEE--------EEEEEEEE-----EEEEEEEEEEEEEE-----------EEEEEE-------EEEEEEEEE-----EEEEEEE----------EEEEEEEEEEEEEE-----EEEEEEEEEEEE--------EEEEEEE------------EEEEEE----	+1.5	+8.3	-0.11
profsec	---EEEEEEE--------------EEEEE------EEEEEEE----EEEEEEEE----EEEEEEEE------EEEEEEEEHHHH---EEEEEEEE-----EEEEEEEEEEEEE------------EEEEEEE-------EEEEEEEEEE---EEEEEEE-------------EEEE--EEEE-----EEEEEEEEEEEEE--------EEEEEEE-------------EEEEE----	+3.3	+11.1	-0.04
sspro2	---EEEEEEE--------------EEEEE--EEEEEE---------EEEEEEEEE----EEEEEEE------EEEEEEE-HHHH---EEEEEEE-----EEE--EEEEEEEEEE----------EEEEEE---------EEEEE-EEE----EEEEEEE------------EEEE---EEEE----EEEEEEEEEEEEEE--------EEEEEEE-------------EEEEE----	+4.5	+13.9	-0.05

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva