EVA results for 1jeq:B

DATE : 2001_08_15
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....
seq	NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTDNPLSGGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLPFRLG
dssp	--EEEEEEEE--HHHH--------HHHHHHHHHHHHHHHHHH-----EEEEEEE-----E-----------EEEEE------HHHHHHHH-----------HHHHHHHHHHHHHHHH------EEEEEEE--------HHHHHHHHHHHHHH-EEEEEEE---------
apssp	----EEEEEE-EEE----------HHHHHHHHHHHHHHHEEE------EEEEEE--------------E--EEE-EHH-----HHHHHHHH----------HHHHHHHHHHHHH-HHHHHHH--HHEEEEE---------HHHHHHHHHHH-----EEE----------	+11.8	+15.8	+0.16
jpred	----EEEEEE--------------HHHHHHHHHHHHHHHHEE-----EEEEEEEE----------------EEE--------HHHHHHHHHHH------HHHHHHHHHHHHHHHHHH-------EEEEEE-----------HHHHHH--------HHHH----------	+6.3	+14.6	+0.08
phd	---EEEEEEE--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------EEEEEEEEE-----HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH-----HHHHEE---------HHHHHHHHHHHHH---EEEEE----------	+5.2	+9.7	+0.10
phdpsi	---EEEEEE---------------HHHHHHHHHHHHHHHHHHH----EEEEEEEE-----------------EEE-------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH--------EEEEEEE-------HHHHHHHHHHHH-------------------	+8.8	+14.2	+0.22
prof_king	---EEEEEEE---------------HHHHHHHHHHHHH--EEE----EEEEEEEE----------------EEEEE------H-HHHHHHHH-------HHHHHHHHHHHHHHHHHH-------EEEEEEE----------HHHEHH---H----EEEEEEEEE-----	+5.5	+2.4	+0.11
profsec	---EEEEEEE--------------HHHHHHHHHHHHHHHHHH-----EEEEEEEE----------------EEEEE------HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH------EEEEEEE-------HHHHHHHHHHHHH------EE----------	+11.2	+16.9	+0.25
psipred	---EEEEEEE--HHH----------HHHHHHHHHHHHHH--------EEEEEEE------------------EEEE------HHHHHHHHHH-------HHHHHHHHHHHHHHHHHH-------EEEEEE-----------HHHHHHHHHH----EEH-------HH--	+9.5	+16.4	+0.20
pssp	---EEEEEEEE--------------HHHHHHHEEEEHH-HHHH-HHHHEEEEEE--------------EE--EEEE-------HHHHHHHHH------HHHHHHHHHEEEEEHHHHHHH-HHHHHHEEEEHHHHHHHHHHHHHHH-HH-------EEE-----------	+3.4	-4.1	+0.05
samt99_sec	---EEEEEEE--------------HHHHHHHHHHHHHHHHHE-----EEEEEEEE-------HH-----EEEEEEE------HHHHHHHHHH------EE-HHHHHHHHHHHHHHHHH------EEEEEE------------HEEE--------EEEEE--------------HHHHHHHHHHH--HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH---EEE--EEEE---EEEEEEEEE---------EEEEE---------EEEEEEEEE------------HHH-------EEE-HHHHHHH------EEEEEE---HH--HHEE----EEEE------HHHHHHHHHHHHHHHHHHHHEEEEEE-------EEEEEE--------EEEEEEE-----HHH---------------HHHHHHHHHHHHHH-HHH---HHHHHH----------HHHHHHHHHHHHHH---------HHHHHHHH----HHHHHHHHHHHHHHHHH------	-1.0	+2.8	0.00
sspro2	---EEEEEEE--------------HHHHHHHHHHHHHHHHHE-----EEEEEEEE----------------EEE--------HHHHHHH---------HHHHHHHHHHHHHHHHHHHHH-----EEEEEEE--------HHHHHHHHHHHH----EEEE-----HHH--	+7.9	+14.9	+0.16

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva