EVA results for 1jb0:F

DATE : 2001_08_01
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14
seq	DVAGLVPCKDSPAFQKRAAAAVNTTADPASGQKRFERYSQALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKDNEITVSPR
dssp	-HHH-EEHHH-HHHHHHHH----------HHHHHHHHH---EE-----E-E-----HHH----HHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHE--HHHHHHHHH-HHHHHHHHHHHHH-------HHH------
apssp	-----------HHHHHHHHHHHH----HHHHHHHHHH------------EEEE---------E-----HHE-EE--E--E-HHHHHHH--------EEEEE--HHHHHHHH-----HHHHHHHHH----EE-----E----	-8.5	-10.7	-0.11
jpred	-----------HHHHHHHHHHH------HHHHHHHHHH-----------EEEE---------------EEEEEE-EE---HHHHHHHHH-------EEEEEEHHHHHHHHHH---HHHHHHHHHH----E-----------	-11.0	-9.8	-0.17
phd	-----------HHHHHHHHHHHHHH--HHHHHHHHHHHHHHH-------EEEE---HHH---E----HHHEEHHHHHHHHHHHHHHHHHH------EEEEEE--HHHHHHHH----HHHHHHHHH---EE------E----	-7.9	-8.6	-0.13
phdpsi	-----------HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------EEE---HHH--EE-----EEEEEHHHHHHHHHHHHHHHHH------EEEEE---HHHHHHHH----HHHHHHHHH----------------	-11.5	-5.0	-0.19
prof_king	-----------HHHHHH--HHHHHHH-HH--HHHHHHHHHH---------EEE--------------HHHHHHH-HH-----HHHHHHH--------EEEEE--HHHHHHH-----HHHHHHHHH---EEE----------	-17	-25.8	-0.22
profsec	-----------HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-------EEEE---------EE------HHHHHHHHHHHHHHHHHHHH-------EEEEE-HHHHHHHHH----HHHHHHHHH----------------	-13.9	-10.8	-0.25
psipred	-----------HHHHHHHHHHHH----HHHHHHHHHH------------EEEE-----------HHHHHHHHHHHHHHHHHHHHHHHHHH-----HHEEEE-HHHHHHHHHHH---HHHHHHHH----EEEE---------	-5.3	-7.1	-0.12
pssp	-EEEEEEE----HHHHHHHHHH--------HHHHHHHHHHH-------EEEEE--------------EEEEEEE-----HHHEEEEEE---------EEEE---HHHHHHH------HHHHHHHHHH-HH-----EEE---	-11.0	-5.2	-0.08
samt99_sec	HH---------HHHHHHHHHHHHHHH--HHHHHHHHHHHHH---------EEE---------EE--HHHHHHHHHHHHHHHHHHHHHHH--------EEEEE-HHHHHHHHH-----HHHHHHHH---EE-----EE----	-12.0	-7.1	-0.18
sspro2	-----------HHHHHH-HHHHHHHH-HHHHHHHHHHHHHHH-------EEEE--------HHH-HHHHHHHHHHHHHHHHHHHHHHHH--------EEEE-HHHHHHHHH----HHHHHHHHHH----------------	-7.8	-18.5	-0.21

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva