EVA results for 1j58:A

DATE : 2002_07_03
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37.
seq	PQPIRGDKGATVKIPRNIERDRQNPDXLVPPETDHGTVSNXKFSFSDTHNRLEKGGYAREVTVRELPISENLASVNXRLKPGAIRELHWHKEAEWAYXIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPIESEGGKVYIADSTNFKVSKTIASALVTVEPGAXRELHWHPNTHEWQYYISGKARXTVFASDGHARTFNYQAGDVGYVPFAXGHYVENIGDEPLVFLEIFKDDHYADVSLNQWLAXLPETFVQAHLDLGKDFTDVLSKEKHPVV
dssp	---EE--EE--------HHHHHH-HHHH------E------EE-HHH---EEE--EEEEEE-----------EEEEEEE----EEEEEEE---EEEEEEEEEEEEEEE-----EEEEEEE--EEEEE-----EEEEEEEEEEEEEEEE------HHHEEEHHHHHH---HHHHHHHH----HHH---------EE-------HHHH-------------EEEHHH---EE---EEEEEE-----------EEEEEEE----EEEEEE-----EEEEEEE-EEEEEEEEE--EEEEEEEE---EEEE----EEEEEE-----EEEEEEE-------EEHHHHHH---HHHHHHHH---HHHH---------E-
apssp	---------EEEE-----------------------------------------------EEE--HHH----HHH------HHHH---------EE-------EEEEEE----EEEEE----EEEEE---EEEEEE------EEEEEE--------HHH---HHHH---HHHHHHHHHHHHHHHH---------E----------EEEE----------EE--------------EEEE-----------E-EE-EE-------EE--------EEEE-------EE----------EE------E-------E--------EEEEE---------E---HH-----HHHHHH-------HH-E--------	+6.5	+19.8	+0.20
apssp2	----------EE------HH----------------EE----EE------HHH---EEEE------HHHHHH----------------HHHHHHHH-------EEEEE-----EEEE-----EEEEE----HHHHHHHH---EEEEEE---------HHHHHHHHH---HHHHHHH----HHHHH------EEEE-------------------EE--EEEE------------EEEEE-------EEEEEEEEEEE---------------EEEEEEE------EEE----EEEEEEE--EEEEE-----EEEE------EEEEEEE----EEEHHHHHHH----HHHHHHHH---HHHHHHHHH------	-9.5	-7.7	-0.15
jpred	----------EE---------------------------------------------EEEEEEE-----------HHH----------------EEEEE----EEEEEE----EEEE------EEEE------EE-------EEEEEE----------EEHHHHH----HHHHHHH----HHHHH---------E------------------------EE-------------EEEEE---------HHHEEEEEE----------------EEEEEE---EEEEEE----EEEEEE----EEEE-----EEEE------EEEEEEE-------E-HHHH------HHHH------HHHHHHHH-------	-2.6	-8.0	-0.03
phd	------------------------------EEE-----------------------EEEEE------HHHHHHHHE-EE----EE--------EEEEEEE--EEEEEE-----HHHHHH----EEEEE----EEEE-----EEEEEEEE------------HHHHHHHHHHHHHHH----HHHHHHHHH----EEEE-------------------------------------EEEEEE----------EEEEEEE--------------EEEEEEEE-EEEEEEEE-----EEEEEE---EEEE------EEE------EEEEEEEE-----EEEEE-------HHHHHHHHH--HHHHHHHHH------	-1.8	-10.3	-0.04
phdpsi	------------------------------EEE-----------------------EEEEE------HHHHHHHHE-EE----EE--------EEEEEEE--EEEEEE-----HHHHHH----EEEEE----EEEE-----EEEEEEEE------------HHHHHHHHHHHHHHH----HHHHHHHHH----EEEE-------------------------------------EEEEEE----------EEEEEEE--------------EEEEEEEE-EEEEEEEE-----EEEEEE---EEEE------EEE------EEEEEEEE-----EEEEE-------HHHHHHHHH--HHHHHHHHH------	-4.5	-12.6	-0.08
prof_king	-----------------EEE---------------------EEEE------------EEEEE-----HHHHHHHHHHHH----EEE--------EEEEE---EEEEEE------EEEE-----EEEE-----EEEEE----EEEEEEEE--------H-HHHHHHH---HHHHHH-----HHHHHH------EEEE----------------------EEEHH-----------EEEEEE-----HHHHHHHEEEEE-----EEEEE-----EEEEEEE---EEEEEE----EEEEEE----EEEEE----EEEEE----EEEEEEEE---------HHHHHH--HHHHHHHH-----HHHHHHHH------	-1.7	-1.6	-0.04
profsec	----------------HHHH--------EEEEEEEEEE---------HHHH------EEEE------HHHHHHHHHHH-----EEEEE-----EEEEEEE--EEEEEEE----EEEEEE----EEEE----EEEEEE----EEEEEEEE------------HHHHH---HHHHHHH----HHHHHHHH----EEEEE------HHHH------------EEEE-----------EEEEEE---------EEEEEEEE---------------EEEEEEEEEEEEEEEE----EEEEEE----EEEEE---EEEEEE-----EEEEEEE-------EEHHHHH----HHHHHHHH---HHHHHHHHHH-----	-3.2	-2.9	-0.07
prospect	----------EEE-------------------------------------------EEEE------HHHH----HHHH------------HHHHHHHH-----EEEEE-----EEEEE-----EEEE---EEEEEE------EEEEEE------------HHHHH----HHHHHHHH---HHHHHHHHH----EEE-----------------------EE-------------EEEE--------HHHHH-EEEEE---------------EEEEEEE----EEEE------EEEEE----EEEE-----EEEE------EEEEEEE-------EEE--------HHHHHHH----HHHHHHHHH------	-7.0	-11.2	-0.09
psipred	--------------------------------------------------------EEEE------HHHHH--EEEEE---------------EEEEEEE-EEEEEEE------HHHH-----EEEE----EEEEE------EEEEEE-----------HHHHHHHH--HHHHHHH----HHHHHHHH---EEEEEE---------------------EEEE------------EEEEE------EEEEEEEEEEEE---------------EEEEEEE--EEEEEE-----EEEEEE----EEEE----EEEEEE-----EEEEEEE------EE-HHHHH----HHHHHHH----HHHHHHHHHH-----	-5.3	-13.6	-0.08
sspro2	----------EEE-----HHH-----------------------------E-------EEEEEEE----H---EEEEE----HHHHH------HHHHHH---EEEEEE------EE--------EE--------H-------EEEEEE----------EEH-HHHH--HHHHHHHH----HHHHH-----EEEEE-------------------------HHH-----EEE---EEEEE------HHHHEEEEEEEE---------------EEEEEEE--EEEEEEE----EEEEEE----EEEE----EEEEE-------EEEEEE------EEEHHHHHHH-HHHHHHHH----HHHHHHHHH------	-5.8	-4.9	-0.10

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva