EVA results for 1iu1:B

DATE : 2002_07_10
TYPE : sec
NRES : 123
HEADER : ENDOCYTOSIS/EXOCYTOSIS
COMPND : 2 MOLECULE: GAMMA1-ADAPTIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : T.NOGI, Y.SHIBA, M.KAWASAKI, T.SHIBA, N.MATSUGAKI, N.IGARASHI,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12..
seq	IAAGIPSITAYSKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNTGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
dssp	-------EEEEEE--EEEEEEEEE------EEEEEEEEEE-----EEEEEEEEE-----EEEE-------E-HHH---EEEEEEEE---------EEEEEEEE--EEEEEEEE-----HHH--
apssp	-------EEEEE----EEEEEE--------EEEEEEEE---------EEEHHE------EEEEE-----EEEE-----EEEEEEEE---HHHHHEEEEEEE-----HHHHHHH----------	+6.5	+19.8	+0.20
apssp2	-------EEEE-----EEEEEEEE-----EEEEEEEEE-------HHHEE-EE-----EEEEEE-----E--------EEEEEEEE------EEEEEEEEEEE---EEEEEEE----------	+5.0	+10.7	+0.03
jpred	-------EEEE-----EEEEEEE-------EEEEEEEEE------HHHEEEEEE----EEEEE---------------EEEEEEEE------EEEEEEEEEE------EEEE-----------	+7.6	+15.5	+0.08
phd	-------EEEEE---EEEEEEEE-------EEEEEEEEE----------EEEEEE---EEEEE---------------EEEEEEEE------EEEEEEEEEEE-------E------------	+9.0	+10.7	+0.07
phdpsi	-------EEEEE---EEEEEEEE-------EEEEEEEEE----------EEEEEE---EEEEE---------------EEEEEEEE------EEEEEEEEEEE-------E------------	+6.3	+8.4	+0.03
prof_king	-------EEEEE----EEEEEE-------EEEEEEEEE---------EEEEEE-----EEEEEE--------------EEEEEEE-------EEEEEEEEEE-----EEEEEEE---------	+4.7	+14.5	0.00
profsec	-------EEEEE---EEEEEEEEE------EEEEEEEEE--------EEEEEEE---EEEEEEE--------------EEEEEEEE-----EEEEEEEEEEEE---EEEEEEEE---------	+8.4	+11.3	+0.09
prospect	-------EEEE-----EEEEEEE------EEEEEEEEEE------HHHHHHHHHHHHH-EEEE---------------HHHHEEEE------EEEEEEEEEEE----EEE-------------	-2.7	+2.2	-0.00
psipred	-------EEEEE---EEEEEEEE------EEEEEEEEEE------HHHHHEEE-----EEEEEE--------------EEEEEEEE------EEEEEEEEEEE---EEEEEEE----------	+5.5	+10.3	+0.08
sspro2	-------EEEEE---EEEEEEEE-------EEEEEEEEE------HHHEEEEEE---EEEEEE---------------EEEEEEEE------EEEEEEEEEEE-----EEE-E----------	+7.7	+9.1	+0.09

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva