EVA results for 1igo:A

DATE : 2002_04_24
TYPE : sec
NRES : 205
HEADER : HYDROLASE
COMPND : 2 MOLECULE: FAMILY 11 XYLANASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS;
AUTHOR : A.J.OAKLEY, C.THOMSON, T.HEINRICH, R.DUNLOP, M.C.J.WILCE

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,
seq	ATTITSNQTGTHDGYDYELWKDSGNTSMTLNSGGAFSAQWSNIGNALFRKGKKFDSTKTHSQLGNISINYNATFNPGGNSYLCVYGWTKDPLTEYYIVDNWGTYRPTGTPKGTFTVDGGTYDIYETTRINQPSIIGIATFKQYWSVRQTKRTSGTVSVSEHFKKWESLGMPMGKMYETALTVEGYQSNGSANVTANVLTIGGKPL
dssp	-EEE---EEEEE--EEEEEEE---EEEEEE-----EEEEEE---EEEEEEEEE------HHHH--EEEEEEEEEE---EEEEEEEEEEE---EEEEEEEEE-------EEEEEEEE--EEEEEEEEEEEEE------EEEEEEEEEE-----EEEE-HHHHHHHHHH------EEEEEEEEEEEE---EEEEEEEEEEEE--EE-
apssp	--EE----------EEEEEEE----EEEEE----EEEEEEE---EEEEE-----------------EEEEEEEE------EEEEEEEE----EEEEEEEEE-----------EEEE---EEEEEEEE----------EEEEEEEEEEE------EEEEEHHHHHHHHH------EEEEEEEEEEE-----EEEEEEEEE------	+3.4	+13.6	+0.02
apssp2	-EEE----EEE---EEEEEEE----EEEEE----EEEEEEE----EEEEE--E----------E-EEEEEEEEE-----EEEEEEEE-----EEEEEEEEE----------EEEEE--EEEEEEEEEEEE-----E-EEEEEEEEEE-----EEEEEHHHHHHHHHH------EEEEEEEEEEEE----EEEEEEEEEE------	+4.8	+7.8	+0.04
jpred	--------------EEEEEEE-----EEEE----EEEEEE----EEEEE----------------EEEEEE-EE-----EEEEEEE------EEEEEEE-------------EEEE---EEEEEEEE------------EEEEEEEEE------EEEEE-HHHHHHHH-------EEEEEEEE-------EEEEEEEEE------	-1.3	+7.8	-0.01
phd	--------------EEEEEEE-----EEEE----EEEEEEE---EEEE----------------EEEEEEEEEE-----EEEEEEE-----EEEEEEEE------------EEEEE---EEEEEEEEE-------E---EEEEEEEEE------EEE-HHHHHHHHHH------EEEEEEEEEE------EEEEEEEE-------	+3.8	+12.7	+0.07
phdpsi	---E----------EEEEEE-----EEEEE----EEEEEEE----EEE----------------EEEEEEEEE------EEEEEEE------EEEEEEE------------EEEE----EEEEEE-E------------EEEEEEEEE------EEE-HHHHHHHHHH------EEEEEEEEEE------EEEEEEEEE------	-0.7	+3.6	+0.03
prof_king	-EEEE---------EEEEEEE----EEEEE----EEEEEEE---EEEEEE--------------EEEEEEEEEE-----EEEEEEE------EEEEEEE------------EEEEE---EEEEEEE-E----------EEEEEEEEE------EEEEEE--HHHHHHH-------EEEEEEEE-------EEEEEEEEE------	+1.8	+8.7	0.00
psipred	-EEE----EEE---EEEEEEEE---EEEEE----EEEEEEE----EEEEE---------------EEEEEEEEE-----EEEEEEEE-----EEEEEEE-------------EEEE---EEEEEEEEEEE--------EEEEEEEEE------EEEEHHHHHHHHHH-------EEEEEEEEEEE----EEEEEEEEEE------	+6.3	+15.2	+0.11
sspro2	-EEE----------EEEEEE-----EEEE-----EEEEEE-----EEEE----------HHH---EEEEEEEEE-----EEEEEEE-----EEEEEEEE------------EEEEE---EEEEEEEEE-----------EEEEEEEE-------EEEHHHHHHHHHH--------EEEEEEEEEE-----EEEEEEEEE------	+1.7	+14.3	+0.10

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 1, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva