EVA results for 1ie4:A

DATE : 2002_04_10
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....1
seq	SKCPLMVKVLDAVRGSPAVDVAVKVFKKTADGSWEPFASGKTAESGELHGLTTDEKFTEGVYRVELDTKSYWKALGISPFHEYAEVVFTANDSGHRHYTIAALLSPYSYSTTAVVSNPQN
dssp	----EEEEEEE----EE----EEEEEEE-----EEEEEEEE-----EE-----------EEEEEEEEHHHHHHHH-----EEEEEEEEEE------EEEEEEEEE--EEEEEE--E----
apssp	----EEEEEEE----EE----EEEEEEE-----EEEEEEEE-------------------EEEEEE-HHHHHH-------E--EEEEEE--------EEEEEEEE--EEEEEEEE-----	+13.6	+14.0	+0.23
apssp2	----EEE-EEE----EE-----EEEEEE-----EEEEEEE------EE------------EEEEEE-HHHHHHH------E-EEEEEEEE-------EEEEEEE---EEEEEEE------	+8.3	+8.5	+0.15
jpred	----EEEEEEE---------EEEEEEE-------EEE----------E------------EEEEEEE---HHH---------EEEEEEEE------EEEEEEEE-----EEEEEE-----	+5.9	+12.7	+0.07
phd	----EEEEEEE--------EEEEEEEEE------HHH---------EEEEE------EEEEEEEEE--HHHHHH------EEEEEEEEEEE----EEEEEEEEE----EEEEEEEE----	+8.0	+15.8	+0.09
phdpsi	-----EEEEE----------EEEEEEEE-----EEEEEEEEE------------------EEEEEEE-HHHHHH-----EEEEEEEEEEEE-----EEEEEEEEE----EEEEEEE----	+11.3	+15.5	+0.18
prof_king	----EEEEEEE--------EEEEEEEEE------EEEEEEEE-----E------------EEEEEEE--HHHHH-------EEEEEEEEE------EEEEEEEE-----EEEEEEE----	+11.0	+19.4	+0.17
profsec	-----EEEEE----------EEEEEEEE-----EEEEEEEEE-----EE-----------EEEEEEEEHHHHHH--------EEEEEEEEE-----EEEEEEEEE----EEEEEEE----	+8.3	+17.3	+0.11
psipred	-----EEEEEE----------EEEEEEE------EEEEEE-------------HHH----EEEEEEEHHHHHHH--------EEEEEEEE-------EEEEEEE----EEEEEEE-----	+5.7	+6.3	+0.10
sspro2	-----EEEEEE---------EEEEEEEE-------E------------------HH----EEEEEEE-HHHHHH---------EEEEEEE-------EEEEEE-------EEEEEE----	-1.4	-0.7	-0.01

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 1, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva