EVA results for 1i8q:A

DATE : 2002_01_16
TYPE : sec
NRES : 814
HEADER : LYASE
COMPND : 2 MOLECULE: HYALURONATE LYASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE;
AUTHOR : S.LI, M.J.JEDRZEJAS

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41...,....42...,....43...,....44...,....45...,....46...,....47...,....48...,....49...,....50...,....51...,....52...,....53...,....54...,....55...,....56...,....57...,....58...,....59...,....60...,....61...,....62...,....63...,....64...,....65...,....66...,....67...,....68...,....69...,....70...,....71...,....72...,....73...,....74...,....75...,....76...,....77...,....78...,....79...,....80...,....81...
seq	SEHPQPVTTQIEKSVNTALNKNYVFNKADYQYTLTNPSLGKIVGGILYPNATGSTTVKISDKSGKIIKEVPLSVTASTEDNFTKLLDKWNDVTIGNYVYDTNDSNMQKLNQKLDETNAKNIEAIKLDSNRTFLWKDLDNLNNSAQLTATYRRLEDLAKQITNPHSTIYKNEKAIRTVKESLAWLHQNFYNVNKDIEGSANWWDFEIGVPRSITGTLSLMNNYFTDAEIKTYTDPIEHFVPDAEYFRKTLVNPFKALGGNLVDMGRVKIIEGLLRKDNTIIEKTSHSLKNLFTTATKAEGFYADGSYIDHTNVAYTGAYGNVLIDGLTQLLPIIQETDYKISNQELDMVYKWINQSFLPLIVKGELMDMSRGRSISREAASSHAAAVEVLRGFLRLANMSNEERNLDLKSTIKTIITSNKFYNVFNNLKSYSDIANMNKLLNDSTVATKPLKSNLSTFNSMDRLAYYNAKKDFGFALSLHSKRTLNYEGMNDENTRGWYTGDGMFYIYNSDQSHYSNHFWPTVNPYKMAGTTEKDAKREDTTKEFMSKHSKDAKEKTGQVTGTSDFVGSVKLNDHFALAAMDFTNWDRTLTAQKGWVILNDKIVFLGSNIKNTNGIGNVSTTIDQRKDDSKTPYTTYVNGKTIDLKQASSQQFTDTKSVFLESKEPGRNIGYIFFKNSTIDIERKEQTGTWNSINRTSKNTSIVSNPFITISQKHDNKGDSYGYMMVPNIDRTSFDKLANSKEVELLENSSKQQVIYDKNSQTWAVIKHDNQESLINNQFKMNKAGLYLVQKVGNDYQNVYYQPQTMTKTDQLAI
dssp	--------------EEEE----EE------EEEE--HHHEEEE--EEEE---EEEEEEEE-----EEEEEEEEEE-----HHHHHHHHHHHHH--HHH-----HHHHHHHHHHHHHHHHHHHH-----------HHH-----HHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH-------------HHHHH-HHHHHHHHHHHH------HHHHHHHHHHHHHH-----EE-------EE---HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH--------EE-----EEE---EE----HHHHHHHHHHHHHHHH--------HHHHHHHHHHHHH--HHHEE--EE-HHH-HHHHH-----HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH-----HHHH---HHHHHHHHHHH------------EEEEEHHH-EEEEEE----EEEEEE------E----E--E----------EEEEE----------HHHH---------EEE--------------------------E-----EEEEE----EEEEEEEEE------EEEEEEEEE--EEEEEEEEEE-------EEEEEEEEE-------EEEE--EE---------EEEEEEEEEEE-------EEEEEEEEEEEEEEEEEEEE-HHHHE--------EEEEEEEEEEE-------EEEEEEE---HHHHHHHH----EEEEEE---EEEEEE----EEEEEE------EE---EE----EEEEEEE----EEEEEEE----EEEE----
apssp	-------EHHHHHHH-------EEE-----EEEE-------EE--EEE------EEEEE------EEE-EE-EE-------HHHHH--E--EE----E------HHHHHHHHHHHHHHHHHHHH------EEEEE---------HHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHH----HHHHHHH----------------------HHH----HHHHHHHHHHHHH----HHHHHHHH-HH----E------------E------EEE---HHHHHHHHHHHH-E---------HHHHHHHHHHHH------EE--------------HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHEEEEE---HHHHH------HHHHHHHHHH-------------EEEE----HHEE-------EEEEEE----HHE------------E-----EEEE-------------E-------------------HHHHHHH------------------E---E----HHHHHH----HHHHHHHHH--EEE---EEEE-------------EEEEEE--------EEEHH---EE---------------EEEE-------EEEEEE----EEEEE-------EEE--------EE---EEEEE-----------EEEE------HHHHHH-----EEEE----EEEEEE----EEEEEEE-----EEEEEEEEE---EEEEEE----EEEEEE-------------	-2.9	-0.4	-0.08
phd	--------HHHHHHHHHHHH--EEEE----EEEE-------EEEEEEEE-----EEEEEE-----EEEE--EEEEE----HHHHHH-----EEEEEEEE----HHHHHHHHHH----HHHHHH-E------HHHHHHHHH--HHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHH-------------EEEEEE-EEEEEEEHHHHH----HHHHH----------HHHHHHHHHH-HHHHH----------HHHHHHH-----EEE----HHHHHHHHH-----EE----EEE--EEEE------EHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH-EEEEEEEEE-------EHHHHHHHHHHHHHHHHHHHHE---------------EEEEEE-EE-----HHH-HHHHHHHHHHH------------------HHHHHHHHHHHHH----EEEE---EE--E---------EE----EEEEE---------------------------------HHHHHHHHHHHHHH----EEEE----EEEEE-HHHHHHHHHH------------EEEEEEEEEEEEEE-----------E-------------EEEE---EEEE------------EEEEEE------EEEEEEE-------------------------EEEE---EEEEE--------EEEEEEE-----HHHH------EEEE------EEEEE-----EEEEE-----HHHHHHHHHHH--EEEEE--------EEEE------------	-8.9	-6.3	-0.10
phdpsi	-----HHHHHHHHHH--------EEEEE--EEEEE-----EE---EEEE-----EEEEEE------HHHH--E-------HHHHHHHHHHHHH----E-----HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH---HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH--------------EEEEE--HHHHHHHHHHHHHH--HHHHHHHHHHHHHH--------------------------HHHHHHHHHHH--HHHHHHHHHHHHHHH------------E-E--------HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHEEEEEEEEEE-----E--------HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHE--------------HHHHHHHHH----------------E---------------EEEEEEE-----------------E-----EEEEE-----------------------------------------------------------------------EE---------EEE--EEEE--EEEEEEE-----------EEEEE----------EEEE-------------------EEEEEE------EEEEEE-----EE---------HHH------------EEEEEE---------EEEEEE----HHHHHHHH----EEEEE-----EEEEE---EEEEEEEEE-------EEEEE---EEEEEEE----EEEEE--------------	+0.2	-1.9	+0.04
prof_king	-------HHHHHHH---------EE-EEEEEEEE------EEE--EEE------EEEEEEE--H--E----EEE------HHHHHHHH---EEE-----------HHHHHHHHHHHHHHHHHH-------EEEEEE-------HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH--------------EEEEE---HHHHHHHHHHHH----HHHHHHHHHHHHH------HHEEE------------HHHHHHHHHHHHH----HHHHHHHHH---EEEEE------EE---EEE----EEE----HHHHHHHHHHHHHH----------HHHHHHHHHHH---HHH----EEEE-----EEEE----HHHHHHHHHHHHHHH-----HHHHHHHHHHHEEEE-------------HHHHHHHHHHHH----------HHHHHH----EEEEE------EEEEEE-----EEEEE--------EEE----EEEE------------------------EEE-------HHHH------------EEEE--EEEE-EE------EEEEEE------EEEEEEEEEE--EEEEEE-----------EEEEEEE---------EEEE---E--------------EEEEEE--------EEEEE----EEEEEEH----EEEE-------------EEEEEE--------EEEEEE----HHHHHHHH----EEEEE----HEEEEE----EEEEEEE---EEEEEEEEEE---EEEEEEE----EEEEEE----------EE-	-0.8	+3.9	-0.00
profsec	-------HHHHHHHH-------EEEEE--EEEEEE-----EEE--EEEE-----EEEEEE-----EEEEE-EEE------HHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH-----HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH--------------EEEEE--HHHHHHHHHHHHHH--HHHHHHHHHHHHHH---------------------HHH--HHHHHHHHHH---HHHHHHHHHHHHH--------------EEEE--------HHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHH---EEEEEEEEE---------------HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHEE---------------HHHHHHHHH-------------HHHH-----EEE-------EEEEEEEE--EEEEEE--------EE----EEEEEE---------------------------------------------------------EEEEE------EEEEEE------EEEEEEEEEE--EEEEEE--EE--------EEEEEE---------EEEE---EE--------------EEEEEE------EEEEEE---EEEEEEHHH-------------------EEEEEE---------EEEEEE----HHHHHHHH----EEEEE----EEEEEE----EEEEEEEE----EEEEEEEEE-EEEEEEEEE---EEEEEE-------------	+1.5	-0.6	+0.03
psipred	-----HHHHHHHHHH-------EEEE---EEEEE----HHHHH--EE-------EEEEE-HHHHHHHHHHHHH--------HHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHH---------------EEE--HHHHHHHHHHHH-----HHHHHHHHHHHHHH---HHHHH-------------HHHHHHHHHHHHH---HHHHHHHHHHHHHHH---------EE---EEEEE----------HHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHH--HH-------------HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH------------HHHHHHHHHHH--------------EEE-----EEE------EEEEEEEE----------------EEEE---EEEE----HHHH---------------------------------------------------EEEE-----EEEEEEEE------EEEEEEEEEE--EEEEEE-----------EEEEEEE---------EEEE-------------------EEEEEE--------EEEE----EEEEEHHH---------------------EEEE---------EEEEEE----HHHHHHHH----EEEEE-----HHHEE----EEEEEEE----EEE--EEEEEEEEEEEEEEE--EEEEEEE-------------	-0.2	-2.3	-0.02
sspro2	---------EEEEE--------E-E----EEEEEE-----EE---EE-------EEEEEE-H---EEEE--HH--------HHHHHHHH---EE---------HHHHHHHHHHHHHHHHHHHH--------EE----------HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHH---HHHHHHHHHHHHHH---HHHHHH----HHHH----HHH-HHHHHHHHHH---HHHHHHHHHHHHH----------EEE--EEEE---------HHHHHHHHHHHHHHHH--------HHHHHHHHHHHHH---HHEE----E------E------HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-------------HHHHHHHHHHH---------------E-----HEEE-------EEEEEE-----EEE-----------E-----EEE-----------------------------------------------------------EEEEE----EEEEEEE-------EEEEEEEEEE--EEEEEE------------EEEEE---------EEEEE---EE--------------EEEEE-------EEEEE----EEEEEEE-----EEE--------------EEEEE---------EEEEEE----HHHHHHHH-----EEEE----EEEEEE----EEEEEEE---EEEE---EEE---EEEEEEE----EEEEEE-------------	+1.1	+1.3	+0.03

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 16, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva