EVA results for 1hlv:A

DATE : 2002_01_16
TYPE : sec
NRES : 131
HEADER : DNA BINDING PROTEIN/DNA
COMPND : 2 MOLECULE: MAJOR CENTROMERE AUTOANTIGEN B;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : Y.TANAKA, O.NUREKI, H.KURUMIZAKA, S.FUKAI, S.KAWAGUCHI, M.IKUTA,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13
seq	MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRRRS
dssp	---------HHHHHHHHHHHHH-----HHHHHHHH---HHHHHHHHH-HHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH--------HHHHHHHHHH--
apssp	-------EEHHHHHHE-EEE---------HHHHH------HHHHHHHHHHHHHHHH----EEE-E-------------HHHHHHHHHHHH----EHHHHHHHHHHHHHHHE----------HHHHHHHH--	-0.0	+18.3	-0.06
jpred	----------HHHHHHHHHHHHH--HHHHHHHHH----HHHHHHHHHHHHHHHHHH-----HHHHH-------HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH----------HHHHHHHH---	+12.0	+15.1	+0.05
phd	---------HHHHHHHHHHHHH-----HHHHHHEE------HHHHHHHHHHHHHHHH---EEEE----------HHHHHHHHHHHHHHHHH----EEEEEHHHHHHHHHHH-----------HHHHHH---	+13.4	+25.9	+0.25
phdpsi	--------HHHHHHHHHHHHHH----HHHHHHHHH---HHHHHHHHHHHHHHHHHHH------HHHHH------HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH--------HHHHHHHHHH---	+13.2	+13.3	+0.10
prof_king	----HEE--HHHHHHHHHHHH------HHHHHHH----HHHHHHHHHHHHHHHHHHH----HHHHHHH------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH----------HHHHHHHHH--	+11.7	+9.8	+0.10
profsec	---------HHHHHHHHHHHHH-----HHHHHHHH---HHHHHHHHHHHHHHHHHH------HHHHHH-----HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH---------HHHHHHHHH---	+11.5	+9.8	+0.08
psipred	------EE-HHHHHHHHHHHHH-----HHHHHHHH---HHHHHHHHHHHHHHHHHHH-----HHHHHH-----HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH---------HHHHHHHHHH--	+11.8	+6.0	+0.09
sspro2	------E--HHHHHHHHHHHHH-----HHHHHHH----HHHHHHHHHHHHHHHHHHHH-----HHHHH-----HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH-----------HHHHHHHH--	+9.2	+6.0	+0.02

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 16, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva