| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3....,....4....,....5....,.. |
| seq | RQEDKDDLDVTELTNEDLLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQGTESRSS | | | |
| dssp | ------------------HHHHH-------------HHHHHHH-HHH---------- | | | |
| apssp | --HH------------HHHHE-EE-------EEEEHHHHHHHHHHHHHH-------- | +5.9 | +13.3 | +0.06 |
| jpred | ---------HHHHHHHHHHHHHHH------------HHHHHHHHHHHHH-------- | +3 | +9.5 | +0.04 |
| phd | --------------HHHHHHHHHHH-------EE--HHHHHHHHHHHHH-------- | +9.3 | +5.1 | +0.19 |
| phdpsi | --------------HHHHHHHHHHH-------EE--HHHHHHHHHHHHH-------- | +6.7 | +3.6 | +0.15 |
| prof_king | ---------EEE--HHHHHHHHHH-------------HHHHHHHHHHHH-------- | +4.5 | -4.5 | +0.02 |
| profsec | --------------HHHHHHHHHHH-----------HHHHHHHHHHHHH-------- | +7.8 | +16.3 | +0.12 |
| psipred | ---------HHHH-HHHHHHHHHH------------HHHHHHHHHHHHHHHHH---- | -4.2 | -16.5 | -0.04 |
| pssp | ---------HHHH---HHHHHHEEEE-----EEE-HHHHHHHHHHHHHH-------- | +7.2 | -6.0 | +0.16 |
| samt99_sec | ---------HHHH-HHHHHHHHHHH----------HHHHHHHHHHHHHHHHH----- | -5.6 | -14.5 | -0.03 |
| sspro2 | -----------E---HHHHHHHHHH-----------HHHHHHHHHHHHHH------- | +5.9 | +0.1 | +0.11 |