EVA results for 1gzs:B

DATE : 2002_09_18
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,
seq	GSLTNKVVKDFMLQTLNDIDIRGSASKDPAYASQTREAILSAVYSKNKDQCCNLLISKGINIAPFLQEIGEAAKNAGLPGTTKNDVFTPSGAGANPFITPLISSANSKYPRMFINQHQQASFKIYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQNTP
dssp	----HHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH----EEEE--EEEE--------HHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH----
apssp	-----EEEEHHHHHH---EE----------HHHHHHHHHHHHHH-------HHHEHH----HHH-HHHHHHHHHH-----------E----------E--EHH-------HHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHH----	-9.1	-18.3	-0.18
apssp2	---HHHHHHHHHHHHH---E---------HHHHHHHHHHHHHHHH--HHHHHHHHHH-----HHHHHHHHHHHH------------E---------EEEEEEE-------HHHHH----EEHHHHHHHHHHHHH-HHH-------HHHHHHHHHHHHHHHH----	-10.2	-13.9	-0.25
jpred	----HHHHHHHHHHH--------------HHHHHHHHHHHHHHH--------EEEE-------HHHHHHHHHHHH---------------------EEEEEEE---------E----HHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHH----	-8.3	+0.4	-0.05
prof_king	------HHHHHHHHH----------------H---HHHHHHHHH----HHHHHHHH-------HHHHHHHHHH--------------------------EHH--------HHH-----HHHHHHHH---HHHHHHHHHH-------HHHHHHHHHHHHHHH----	-6.6	-19.0	-0.07
prospect_secstruc	---HHHHHHHHHHH--------------HHHHHHHHHHHHHHHH---HHHHHHHHHH------HHHHHHHHHHHH-------------------------HHHH------HHHHHH--EE-HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH------	+1.5	-3.4	-0.04
sspro2	-----HHHHHHHHHHH------------HHHHHHHHHHHHHHHH-----HHHHEEE-----HHHHHHHHHHHHHH------------------------HHHH--------EHH--HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHH---	-2.9	-4.2	-0.08
prospect	---HHHHHHHHHHH--------------HHHHHHHHHHHHHHHH---HHHHHHHHHH------HHHHHHHHHHHH-------------------------HHHH------HHHHHH--EE-HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH------	+1.5	-2.6	-0.04

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva