EVA results for 1gu1:A

DATE : 2002_04_17
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....
seq	RSLANAPIMILNGPNLNLLGQRQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPVVEVHISNIHQREPFRHHSYVSQRADGVVAGCGVQGYVFGVERIAALAG
dssp	-------EEEEE---HHH-----HHHH----HHHHHHHHHHHHH-----EEEEE---HHHHHHHHHHHHHH---EEEE---HHHH-HHHHHHHH------EEEEE---HHH--HHH----HHH---EEEE----HHHHHHHHHHHHHH-
apssp	-------EEEE-------------------HHHHHHHHHHHHHHH---EEEEEE---HHHHHHHHHHHH----EEEE------HHHHHHHHHHHHH----EEEEEE-------------E------EEEEE---HHHHHHHHHHHHH--	+2.3	+2.3	+0.08
apssp2	-------EEEEE---HHH-----HHHH----HHHHHHHHHHHHHH----EEEEE---HHHHHHHHHHHHHH--EEEEE--HHHHH-HHHHHHHH------EEEEE---HHH--HHH---EHHH---EEEE----HHHHHHHHHHHHHH-	+14.8	+21.2	+0.36
jpred	-------EEEE--------------------HHHHHHHHHHHHHH---EEEEE----HHHHHHHHHHHH----EEEE-------HHHHHHHHHHHH----EEEEEE-------------EE-----EEEEE----HHHHHHHHHHHH--	+2.4	+3.8	+0.08
phd	-----EEEEEE--------------------HHHHHHHHHHHHHH---EEEEE----HHHHHHHHHHHH----EEEE-----HHHHHHHHHHHHHH----EEEEEE--------------------EEEEE--HHHHHHHHHHHHHH--	+6.9	+4.2	+0.17
phdpsi	-----EEEEEE-------------------HHHHHHHHHHHHHHH---EEEEE-----HHHHHHHHHHH----EEEEE----HHHHHHHHHHHHHH----EEEEEE---------------E---EEEEE---HHHHHHHHHHHHHH--	+2.0	+2.6	+0.09
profsec	------EEEEE--------------------HHHHHHHHHHHHHH---EEEEEE----HHHHHHHHHHH----EEEEE----HHHHHHHHHHHHHH----EEEEEE-------------EE-----EEEE---HHHHHHHHHHHHHH--	+1.8	+0.9	+0.09
psipred	------EEEEEE-------------------HHHHHHHHHHHHHH---EEEEEE---HHHHHHHHHHH-----EEEE---HHHHHHHHHHHHHHH-----EEEEEE---HH--HHHH--EE-----EEEE---HHHHHHHHHHHHHH--	+4.3	+5.9	+0.09
sspro2	------EEEEE----HH--------------HHHHHHHHHHHHHH---EEEEEE---HHHHHHHHHHH-----EEEE--HHHHHHHHHHHHHHHHH----EEEEEEE------------EE-----EEEE---HHHHHHHHHHHHHH--	+0.6	+3.5	+0.03

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 1, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva