EVA results for 1gth:C

DATE : 2002_04_17
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41...,....42...,....43...,....44...,....45...,....46...,....47...,....48...,....49...,....50...,....51...,....52...,....53...,....54...,....55...,....56...,....57...,....58...,....59...,....60...,....61...,....62...,....63...,....64...,....65...,....66...,....67...,....68...,....69...,....70...,....71...,....72...,....73...,....74...,....75...,....76...,....77...,....78...,....79...,....80...,....81...,....82...,....83...,....84...,....85...,....86...,....87...,....88...,....89...,....90.
seq	APVLSKDVADIESILALNPRTQSHAALHSTLAKKLDKKHWKRNPDKNCFHCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHQKGKPVPRIAELMGKKLPNFGPYLEQRKKIIAEEKMRLKEQNAL
dssp	--------HHHHHH----------E----HHHHHHHHHHH---------------------------HHHHHHHHHH-------HHHH-------HHHHHHHHH---HHHHHHHHHHH---HHHHHHH--HHH-HHHH-HHHH-------HHHHHHHHHHHHHHH----E-------HHH--HHHH--EEEE---HHHHHHHHHHHHH----EEEEE-------HHHH--------HHHHHHHHHHHH----EEEE---E----E-HHHHHH----EEEE-----EE---HHH--------EEEHHHHHHHHHHHH----------------EEEEE---HHHHHHHHHHHHH---EEEEE----HHH----HHHHHHHHH---EEE--EEEEEEEEE--EEEEEEEEEEEE-----EEEEEEEEEEEE--EEEE---EE---HHHHHH-----E-----E-------E-----EEE-HHHH-----HHHHHHHHHHHHHHHHHHHHHH----------E---E-HHHH----EEE--EEE---EEE---HHH--HHHHHHHHHH---EEE---E--HHH--------EEE--------------EEE--------HHHHHHHHHHHHHH----EEEEEE-----HHHHHHHHHHHHH----EEEEE------HHHH---HHHH--HHHHHHHHHHHHHH----EEEEE------HHHHHHHHHHH---EEEE---EEE---E-----E---E----EE--EEEE-HHHHHHHHHHHHHHHHH-----EEEE-----HHHHHHHHH----EEEE-HHHH-----HHHHHHHHHHHHHHH---HHH---E--E-----EE--EE---------------HHHHHHHHHHHHHHHHHHHHH---
phd	--------HHHHHHHHH--HHHHH-----HHHHHHH---------------HHHHH-----EE----HHHHHHHHHHHHH---------------HHHHHHHHH---HHHHHHHHHH------EEE----------------------EE---HHHHHHHHHHH-----------------------EEEEEE--HHHHHHHHHHHHH---EEEEE---------EEEE-------HHHHHHHHHHHHH---EEEE-----------HHHHH----EEEEE---------HHH----------HHHHHHHH---------------------EEEEE---HHHHHHHHHHHHH----EEEEEE---------HHHHHHHHH---EEEEE---EEEEEE--EEEEEEEEEE--------------EEEE---EEEEE---------------------------------------E----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------EEE----EE--------------HHHHHHHHH----EEEEEEE-----------------------EEE-----E---------HHHHHHHHHHHH------EEEEEEE----HHHHHHHHHHH------EEEEE-------------------HHHHHHHHHHHHHH----EEEE----HHHHHHHHHHHHH-----EEEHHHHHHHHHHH-----EE---------------HHHHHHHHHHHHHHHHHH----EEE----HHHHHHHHHHHHHHHHEEE-EEEE-------HHHHHHHHHHHHHH-HHHHHHHH------------------HHH----------HHHHHHHHHHHHHHHHHHHHHH	+4.2	-2.5	+0.04
phdpsi	--------HHHHHHHHH--HHHHH-----HHHHHHH---------------HHHHH-----EE----HHHHHHHHHHHHH---------------HHHHHHHHH---HHHHHHHHHH------EEE----------------------EE---HHHHHHHHHHH-----------------------EEEEEE--HHHHHHHHHHHHH---EEEEE---------EEEE-------HHHHHHHHHHHHH---EEEE-----------HHHHH----EEEEE---------HHH----------HHHHHHHH---------------------EEEEE---HHHHHHHHHHHHH----EEEEEE---------HHHHHHHHH---EEEEE---EEEEEE--EEEEEEEEEE--------------EEEE---EEEEE---------------------------------------E----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------EEE----EE--------------HHHHHHHHH----EEEEEEE-----------------------EEE-----E---------HHHHHHHHHHHH------EEEEEEE----HHHHHHHHHHH------EEEEE-------------------HHHHHHHHHHHHHH----EEEE----HHHHHHHHHHHHH-----EEEHHHHHHHHHHH-----EE---------------HHHHHHHHHHHHHHHHHH----EEE----HHHHHHHHHHHHHHHHEEE-EEEE-------HHHHHHHHHHHHHH-HHHHHHHH------------------HHH----------HHHHHHHHHHHHHHHHHHHHHH	0.0	-6.3	-0.01
profsec	--------HHHHHHHHH---HHHHH----HHHHHH---------------HHHHH-----EE-----HHHHHHHHHHHHH---------------HHHHHHHHH---HHHHHHHHHH------EE-EE---------EEEEEE-----EEE--HHHHHHHHHHHH-----------------------EEEEE--HHHHHHHHHHHH----EEEEE--------------------HHHHHHHHHHHHH---EEEE----------HHHHHH----EEEEEE---------------------HHHHHHHHH--------------------EEEEE---HHHHHHHHHHHHH---EEEEEEE---------HHHHHHHHH---EEEEE---EEEEEE--EEEEEEEEEE--------------EEEEE--EEEE----------HHH--------------------------EEE---EE-HHHEEEHHHHHHHHHHHHHHHHHHHH---------------------EEEEE---EEE--------------HHHHHHHHH----EEEEEEE---HHHH----------------EEE-----EEEE------HHHHHHHHHHHH------EEEEEE-----HHHHHHHHHHH------EEEEE-------------EE----HHHHHHHHHHHHHH----EEEE----HHHHHHHHHHHHH-----EEEHHHHHHHHHHH-----EEEE------------HHHHHHHHHHHHHHHHHHH----EEEE-----HHHHHHHHHH----EEEEEEEE-----HHHHHHHHHHHHHHHH-HHHHHHHH---------------HHHHHHH----------HHHHHHHHHHHHHHHHH-HHH	-1.8	-7.8	-0.05
psipred	----------HHHHHH-------------HHHHHH---------------HHHHHHHHHH-------HHHHHHHHHHHH-----------------HHHHHHHH---HHHHHHHHHHH-----HHEE------------EE-------------HHHHHHHHHH-----------------------EEEEE---HHHHHHHHHHHH----EEEEEE-----------------HHHHHHHHHHHHHHH---EEE---EEE-----HHHHHH----EEEEE--------------------EEEE--HHHHHHHH-----------------EEEEE---HHHHHHHHHHHH----EEEEEEE--HHHHH--HHHHHHHHH---EEEE--EEEEEEE---EEEEEEEEEEE------EE-----EEEEE--EEEEE-------HHHHHHH---EE-----EEE-----------EEEEEE------HHHHHHH-HHHHHHHHHHHHHHHHH--------EE----------EEEEE--------EEEE-------HHHHHHHHH----EEEEEEE-------------EEE----------------------HHHHHHHHHHHHHH--------EEEEE-----HHHHHHHHHHHH-----EEEEE-----------HHHHH---HHHHHHHHHHHHHH----EEEEE---HHHHHHHHHHHHH----EEEEEEEEEEEEEEE------------------------HHHHHHHHHHHHHHHH----EEEE-----HHHHHHHHHH---HHHHHHHHHH----HHHHHHHHHHHHHHH----HHHH-----------------HHHHHHHH----------HHH-----HHHHHHH---HH	-0.8	-6.8	-0.03
sspro2	----------HHHHHH-------HH------------EEE----------HHHHHH-HHHHH-----HHHHHHHHHHHH-----------------HHHHHHHHH--HHHHHHHHH----------------------EEE---------HHHHHHHHHHHHHH-------------HHH-------EEEEE---HHHHHHHHHHHH----EEEEEE-------EE----------HHHHHHHHHHHHH---EEEE-EEE----E-HHHHHHH---EEEEEE--------------------E-HHHHHHHHH-------------------EEEEEE---HHHHHHHHHHH----EEEEEEE---H-----HHHHHHHHH---EEEE---EEEEE----EEEEEEEEEEE------E------EEEE---EEEEEE--------HHH----EEE----EEEE-----------EEEE-------HHHEHEHHHHHHHHHHHHHHHHH------------------------EEEE--------E-E--------HHHHHHHHH----EEEEE--------------EEEEE-----------HHHHHH------HHHHHHHHHHHHHHH----EEEEEE-----HHHHHHHHHHHH-----EEEEEE------------HE----HHHHHHHHHHHHHH----EEEEE---HHHHHHHHHHHHH----EEEEEEE-------EE---------------------H-HHHHHHHHHHHHHHH-----EEEE-----HHHHHHHHHH---EEEEEEEHH----HHHHHHHHHHHHHHHH-----HHHH-------HHH-------HHHHH---------HHHHHHHHHHHHHHHHHHH----	-1.0	-8.1	-0.04

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 1, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva