EVA results for 1gt8:D

DATE : 2002_04_17
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41...,....42...,....43...,....44...,....45...,....46...,....47...,....48...,....49...,....50...,....51...,....52...,....53...,....54...,....55...,....56...,....57...,....58...,....59...,....60...,....61...,....62...,....63...,....64...,....65...,....66...,....67...,.
seq	APVLSKDVADIESILALNPRTQSHAALHSTLAKKLDKKHWKRNPDKNCFHCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGM
dssp	--------HHHHHH----------E----HHHHHHHHHHH---------------------------HHHHHHHHHH-------HHHH-------HHHHHHHHH---HHHHHHHHHHH---HHHHHHH--HHH-HHHH-HHHH-------HHHHHHHHHHHHHH-------------HHH--HHHH-EEEEE---HHHHHHHHHHHHH---EEEEEE-------HHHH--------HHHHHHHHHHHH----EEEE---E----E-HHHHHHH-EEEEEE-----EE---HHH--------EEEHHHHHHHHHHHH----------------EEEEE---HHHHHHHHHHHH----EEEEE----HHH----HHHHHHHHH---EEE--EEEEEEEE----EEEEEEEEEEE-----EEEEEEEEEEE---EEEE---EE---HHHHHH-----E-----E-------E-----EEE-HHHH-----HHHHHHHHHHHHHHHHHHHHHH----------E-----HHHH----EEE--EEE---EEE---HHH--HHHHHHHHHH---EEE---E--HHH--------EEE--------------EEE--------HHHHHHHHHHHHHH----EEEEEE-----HHHHHHHHHHHHHH---EEEEE---E-----
phd	--------HHHHHHHHH--HHHHHH----HHHHHH----------------HHHHH-----EE----HHHHHHHHHHHHH----------------HHHHHHHH---HHHHHHHHHH------EEE------------E---E-----EE---HHHHHHHHHHH-----------------------EEEEEE--HHHHHHHHHHHHH---EEEEE---------EEEE------HHHHHHHHHHHHHH---EEEE-----------HHHHH----EEEEE---------HHH----------HHHHHHHH---------------------EEEEE---HHHHHHHHHHHHH----EEEEEE---------HHHHHHHHH---EEEEE---EEEEEE--EEEEEEEEEE--------------EEEE---EEEEE---------------------------------------E----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------EEE----EE--------------HHHHHHHHH----EEEEEEE-----------------------EEE-----EE--------HHHHHHHHHHHH------EEEEEEE----HHHHHHHHHHH------EEEEE---------	+5.1	-1.3	+0.07
phdpsi	--------HHHHHHHHH--HHHHHH----HHHHHH----------------HHHHH-----EE----HHHHHHHHHHHHH----------------HHHHHHHH---HHHHHHHHHH------EEE------------E---E-----EE---HHHHHHHHHHH-----------------------EEEEEE--HHHHHHHHHHHHH---EEEEE---------EEEE------HHHHHHHHHHHHHH---EEEE-----------HHHHH----EEEEE---------HHH----------HHHHHHHH---------------------EEEEE---HHHHHHHHHHHHH----EEEEEE---------HHHHHHHHH---EEEEE---EEEEEE--EEEEEEEEEE--------------EEEE---EEEEE---------------------------------------E----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------EEE----EE--------------HHHHHHHHH----EEEEEEE-----------------------EEE-----EE--------HHHHHHHHHHHH------EEEEEEE----HHHHHHHHHHH------EEEEE---------	+0.9	-5.1	+0.01
prof_king	----------HHHHHH-------HHHH---HHHH---HH-----------HHHHH-----EEE----HHHHHHHHHHHH-----------------HHHHHHH----HHHHHHHHHH----------------HH----EE-------------HHHHHHHHHH-----------------------EEEEE----HHHHHHHHHHHH----EEEEEE-------EE----------HHHHHHHHHHHH---EEEE-EEEE----HHHHHHH----EEEEEE-------------------EEE-HHHHHHHH-------------------EEEEEE---HHHHHHHHHHHH---EEEEEEE---------HHHHHHHHHHHHEEEEE--EEEEEEE--EEEEEEEEEEEE-----EEE----EEEEEEEEEEEEE------HHHHHHH---EE-----EEE----------EEEEE--EE----HEEEEE--HHHHHHHHHHHHHHH------------------------HEE-------------------HHHHHHHHHH---EEEEEEE------------EEEE----------------HHHH--HHHHHHHHHHHHHHHH-----EEEEEE-----HHHHHHHHHHHH-----EEEEE---------	+0.2	-3.2	-0.00
profsec	--------HHHHHHHHH---HHHHH----HHHHHH---------------HHHHH-----EE-----HHHHHHHHHHHHH---------------HHHHHHHHH---HHHHHHHHHH------EE-EE---------EEEEEE-----EEE--HHHHHHHHHHH------------------------EEEEE--HHHHHHHHHHHH----EEEEE--------------------HHHHHHHHHHHHH---EEEE----------HHHHHH----EEEEEE--------------------HHHHHHHHHH--------------------EEEEE---HHHHHHHHHHHHH---EEEEEEE---------HHHHHHHHH---EEEEE----EEEEE--EEEEEEEEEE--------------EEEEE--EEEE----------HHH--------------------------EEE---EE----EEEEHHHHHHHHHHHHHHHHHHH--------------------EEEEEEE--EEE--------------HHHHHHHHH----EEEEEEE------EE---------------EEE----EEEEE------HHHHHHHHHHHH------EEEEEE-----HHHHHHHHHHH------EEEEE---------	-1.0	-8.0	-0.03
psipred	----------HHHHHH-------------HHHHHH---------------HHHHHHHHHH-------HHHHHHHHHHHH-----------------HHHHHHHH---HHHHHHHHHHH-----HHEE------------EE-------------HHHHHHHHHH-----------------------EEEEE---HHHHHHHHHHHH----EEEEEE-----------------HHHHHHHHHHHHHHH---EEE---EEE-----HHHHHH----EEEEE--------------------EEEE--HHHHHH-------------------EEEEE---HHHHHHHHHHHH----EEEEEEE--HHHHH--HHHHHHHHH---EEEE--EEEEEEE---EEEEEEEEEEE------EE-----EEEEE--EEEEE-------HHHHHHH---EE-----EEE-----------EEEEEE------HHHHHHH-HHHHHHHHHHHHHHHH---------------------EEEHH--------EEE--------HHHHHHHHHH---EEEEEEE-------------EEE------EE---------------HHHHHHHHHHHHH--------EEEEE-----HHHHHHHHHHHHH----EEEE---------H	+0.7	-4.4	-0.00
sspro2	----------HHHHHH-------HH------------EEE----------HHHHHH-HHHHH-----HHHHHHHHHHHH-----------------HHHHHHHHH--HHHHHHHHH----------------------EEE---------HHHHHHHHHHHHHH-------------HHH-------EEEEE---HHHHHHHHHHHH----EEEEEE-------EE----------HHHHHHHHHHHHH---EEEE-EEE----E-HHHHHHH---EEEEEE--------------------E-HHHHHHHHH-------------------EEEEEE---HHHHHHHHHHH----EEEEEEE---H-----HHHHHHHHH---EEEE---EEEEE----EEEEEEEEEEE------EE-----EEEE---EEEEEE--------HHH----EEE----EEEE-----------EEEE-------HHHEHEHHHHHHHHHHHHHHHHH------------------------EEEE--------E-E--------HHHHHHHHH----EEEEE--------------EEEEE-----------HHHHHH------HHHHHHHHHHHHHHH-----EEEEEE----HHHHHHHHHHHH-----EEEEEE--------	-0.6	-7.2	-0.03

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 1, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva