EVA results for 1gef:A

DATE : 2001_03_21
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....1
seq	MYRKGAQAERELIKLLEKHGFAVVRSAGSKKVDLVAGNGKKYLCIEVKVTKKDHLYVGKRDMGRLIEFSRRFGGIPVLAVKFLNVGWRFIEVSPKIEKFVFTPSSGVSLEVLLGIQKTLE
dssp	--HHHHHHHHHHHHHHHH---EEEEEHHH----EEEE----EEEEEEEEE----EEE-HHHHHHHHHHHHHH--EEEEEEEE---EEEEEE-------EEE-HHH-E-HHHH--HHH---
jpred	------HHHHHHHHHHHH---EEEEE------EEEE----EEEEEEEE-----EEEE--HHHHHHHHHHHH-----EEEEEE----EEEEEE------EEE------HHHHHHH------	+1.5	+14.2	+0.12
phd	-----HHHHHHHHHHHHH---EEEEE------EEEE-----EEEEEEE-----EEEEEHHHHHHHHHHHHHH----EEEEEEE---EEEEEE-----EEEE------EEHHHHHHHHH--	+6.1	+15.7	+0.19
phdpsi	------HHHHHHHHHHHH---EEEEE------EEEEE---EEEEEEEE-----EEEE--HHHHHHHHHHHH----EEEEEEEE---EEEEE-------EEE------EEEEEEEEEEE--	-0.6	+12.1	+0.09
prof_king	-------HHHHHHHHHHH---EEEEE-----EEEEEE---EEEEEEEEE----EEEE----HHHHHHHHHH----EEEEEEEE---EEEEE------EEEEE------EEEEEEEEE---	-3.5	+10.8	+0.03
profsec	------HHHHHHHHHHHH---EEEEE------EEEEE---EEEEEEEE-----EEEE-HHHHHHHHHHHHH----EEEEEEEE---EEEEE------EEEEE-----EEEEEEEEEEE--	-3.8	+8.2	+0.02
psipred	------HHHHHHHHHHHH---EEEE--------EEEE---EEEEEEEE------EEE-HHHHHHHHHHHHH----EEEEEEEE---EEEEE-------EEE------EEEEEE-------	+0.5	+9.4	+0.09
pssp	----HHHHHHHHHHHHHH---EEEE------EEEEE-----EEEEEEEEE----EEE-----HHHHHH--------EEEEEHH--EEEEEEE---EEEEEEE------HHEEHHHHH---	+8.7	+18.6	+0.18
samt99_sec	------HHHHHHHHHHHHH--EEEE--------EEEE---EEEEEEEEE-----EEE-HHHHHHHHHHHHHH----EEEEEE----EEEEE-------EE--------HHHHHHHHHHH-	+4.9	+12.9	+0.19
sspro1	------HHHHHHHHHHHH---EEEE-------EEEE----EEEEEEEEEE---EEEE-HHHHHHHHHHHHHH----EEEEEEE---EEEEE------EEEE-------EEEEEEEEE---	-0.9	+11.0	+0.05

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva